Gene detail information of Glyur000515s00023218.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G21990.10APS reductase 3
NRKEH36874.105'-adenylylsulfate reductase [Medicago truncatula]
COGYP_005885545.11.00E-101phosphoadenosine phosphosulfate reductase [Marinobacter adhaerens HP15]
Swissprottr|P92980|APR3_ARATH05'-adenylylsulfate reductase 3, chloroplastic (Precursor)
trEMBLtr|A0A072V4H5|A0A072V4H5_MEDTR05'-adenylylsulfate reductase {ECO:0000313|EMBL:KEH36874.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005153407536988+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05907APR EC:1.8.4.9 Sulfur metabolism map00920


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0019419  sulfate reduction

GO:0045454  cell redox homeostasis

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0016671  oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000515s00023218.1PF01507.14PAPS_reduct1152955.00E-42
Glyur000515s00023218.1PF00085.15Thioredoxin3704641.60E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.314
SRR1783600control25.466
SRR1783602moderate drought stress24.298
SRR1811619moderate drought stress24.036

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain98.183
DRR006520Root Summer glycyrrhizin high producing strain96.901
DRR006521Root Winter glycyrrhizin high producing strain18.730
DRR006522Root Winter glycyrrhizin high producing strain18.168
DRR006523Root Summer glycyrrhizin low producing strain49.892
DRR006524Root Summer glycyrrhizin low producing strain50.132
DRR006525Leaf Summer glycyrrhizin high producing strain99.195
DRR006526Leaf Summer glycyrrhizin high producing strain98.731

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)100.552
SRR2868004Drought Stress(Tissue:root)154.693
SRR2967015Control (Tissue:root)49.408

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave229.667
SRR9715740Leave319.626
SRR9715741Leave247.288
SRR9715739Root12.962
SRR9715742Root45.722
SRR9715743Root38.865

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.636
SRR8749028MeJA induced 9h27.096
SRR8749029MeJA induced 9h10.440
SRR8749030Uninduced175.008
SRR8749031Uninduced54.714
SRR8749032Uninduced30.637

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root109.978
SRR8400027Control-Root71.112

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved