Gene detail information of Glyur000516s00022250.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G03940.10Protein kinase family protein
NRXP_004493152.10PREDICTED: uncharacterized protein LOC101504885 isoform X1 [Cicer arietinum]
COGYP_005321927.12.00E-14peptidase c14 caspase catalytic subunit p20 [Saprospira grandis str. Lewin]
Swissprottr|P42158|KC1D_ARATH2.00E-55Casein kinase I isoform delta-like
trEMBLtr|V7CYE5|V7CYE5_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW33931.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005162753835474-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000516s00022250.1PF00069.20Pkinase1474031.30E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control49.538
SRR1783600control50.143
SRR1783602moderate drought stress39.047
SRR1811619moderate drought stress38.436

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain61.020
DRR006520Root Summer glycyrrhizin high producing strain60.118
DRR006521Root Winter glycyrrhizin high producing strain49.875
DRR006522Root Winter glycyrrhizin high producing strain48.285
DRR006523Root Summer glycyrrhizin low producing strain58.955
DRR006524Root Summer glycyrrhizin low producing strain58.745
DRR006525Leaf Summer glycyrrhizin high producing strain39.480
DRR006526Leaf Summer glycyrrhizin high producing strain39.228

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)68.484
SRR2868004Drought Stress(Tissue:root)72.165
SRR2967015Control (Tissue:root)67.287

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave33.686
SRR9715740Leave40.977
SRR9715741Leave40.122
SRR9715739Root10.542
SRR9715742Root48.478
SRR9715743Root39.374

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h130.201
SRR8749028MeJA induced 9h101.732
SRR8749029MeJA induced 9h98.296
SRR8749030Uninduced68.427
SRR8749031Uninduced116.778
SRR8749032Uninduced68.914

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root63.126
SRR8400027Control-Root61.891

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved