Gene detail information of Glyur000517s00018398.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G19690.17.00E-85staurosporin and temperature sensitive 3-like A
NRXP_003516821.11.62E-136PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A-like [Glycine max]
COGYP_008797149.14.00E-12conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum]
Swissprottr|Q6F2Z1|STT3A_ORYSJ3.00E-123Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
trEMBLtr|I1J4K6|I1J4K6_SOYBN6.00E-137Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G01270.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0051798605115952+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT66


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07151STT3 EC:2.4.99.18 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513
Protein processing in endoplasmic reticulummap04141


Gene Ontology

biological_process

GO:0006486  protein glycosylation


cellular_component

GO:0016020  membrane


molecular_function

GO:0004576  oligosaccharyl transferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000517s00018398.1PF02516.9STT346864.90E-08
Glyur000517s00018398.1PF02516.9STT31423263.40E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.893
SRR1783600control3.013
SRR1783602moderate drought stress3.613
SRR1811619moderate drought stress4.692

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.837
DRR006520Root Summer glycyrrhizin high producing strain4.903
DRR006521Root Winter glycyrrhizin high producing strain4.454
DRR006522Root Winter glycyrrhizin high producing strain3.438
DRR006523Root Summer glycyrrhizin low producing strain6.414
DRR006524Root Summer glycyrrhizin low producing strain5.654
DRR006525Leaf Summer glycyrrhizin high producing strain1.152
DRR006526Leaf Summer glycyrrhizin high producing strain1.554

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.070
SRR2868004Drought Stress(Tissue:root)5.081
SRR2967015Control (Tissue:root)5.380

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.765
SRR9715740Leave0.062
SRR9715741Leave1.360
SRR9715739Root0.046
SRR9715742Root1.640
SRR9715743Root1.289

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.243
SRR8749028MeJA induced 9h1.931
SRR8749029MeJA induced 9h1.244
SRR8749030Uninduced2.237
SRR8749031Uninduced0.897
SRR8749032Uninduced1.810

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.397
SRR8400027Control-Root2.470

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved