Gene detail information of Glyur000518s00035530.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G60900.11.00E-166receptor-like protein kinase 1
NRXP_004488803.10PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Cicer arietinum]
COGYP_001958461.13.00E-22hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q39202|RLK1_ARATH0G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 (Precursor)
trEMBLtr|A0A072V8H5|A0A072V8H5_MEDTR0Lectin kinase family protein {ECO:0000313|EMBL:KEH38324.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005182996440340+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000518s00035530.1PF00314.12Thaumatin332521.70E-79
Glyur000518s00035530.1PF01453.19B_lectin3134011.60E-15
Glyur000518s00035530.1PF00069.20Pkinase75110122.70E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.265
SRR1783600control2.176
SRR1783602moderate drought stress0.954
SRR1811619moderate drought stress0.970

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.533
DRR006520Root Summer glycyrrhizin high producing strain2.384
DRR006521Root Winter glycyrrhizin high producing strain0.473
DRR006522Root Winter glycyrrhizin high producing strain0.478
DRR006523Root Summer glycyrrhizin low producing strain2.149
DRR006524Root Summer glycyrrhizin low producing strain2.184
DRR006525Leaf Summer glycyrrhizin high producing strain2.697
DRR006526Leaf Summer glycyrrhizin high producing strain2.698

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.113
SRR2868004Drought Stress(Tissue:root)5.228
SRR2967015Control (Tissue:root)4.864

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.075
SRR9715740Leave5.384
SRR9715741Leave21.419
SRR9715739Root2.140
SRR9715742Root3.876
SRR9715743Root3.381

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.213
SRR8749028MeJA induced 9h1.787
SRR8749029MeJA induced 9h1.025
SRR8749030Uninduced4.564
SRR8749031Uninduced0.609
SRR8749032Uninduced0.747

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.472
SRR8400027Control-Root8.181

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved