Gene detail information of Glyur000518s00035532.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G60900.19.00E-88receptor-like protein kinase 1
NRAES66383.26.93E-163malectin/receptor-like kinase family protein [Medicago truncatula]
COGYP_006807242.18.00E-18serine/threonine protein kinase [Nocardia brasiliensis ATCC 700358]
Swissprottr|Q39202|RLK1_ARATH8.00E-105G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 (Precursor)
trEMBLtr|G7ITC6|G7ITC6_MEDTR3.00E-163Malectin/receptor-like kinase family protein {ECO:0000313|EMBL:AES66383.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005186622967047+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0009966  regulation of signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000518s00035532.1PF00069.20Pkinase42441.80E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.413
SRR1783600control0.577
SRR1783602moderate drought stress0.503
SRR1811619moderate drought stress0.440

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.397
DRR006520Root Summer glycyrrhizin high producing strain0.395
DRR006521Root Winter glycyrrhizin high producing strain0.477
DRR006522Root Winter glycyrrhizin high producing strain0.133
DRR006523Root Summer glycyrrhizin low producing strain1.275
DRR006524Root Summer glycyrrhizin low producing strain1.147
DRR006525Leaf Summer glycyrrhizin high producing strain1.411
DRR006526Leaf Summer glycyrrhizin high producing strain1.938

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.233
SRR2868004Drought Stress(Tissue:root)0.514
SRR2967015Control (Tissue:root)0.224

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.071
SRR9715740Leave4.422
SRR9715741Leave11.364
SRR9715739Root0.351
SRR9715742Root1.588
SRR9715743Root1.531

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.953
SRR8749028MeJA induced 9h2.656
SRR8749029MeJA induced 9h2.912
SRR8749030Uninduced17.073
SRR8749031Uninduced2.961
SRR8749032Uninduced3.464

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.177
SRR8400027Control-Root2.498

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved