Gene detail information of Glyur000519s00019093.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G43190.10sucrose synthase 4
NRAEF56625.10sucrose synthase [Arachis hypogaea var. vulgaris]
COGYP_003529337.10sucrose synthase [Nitrosococcus halophilus Nc 4]
Swissprottr|P13708|SUSY_SOYBN0Sucrose synthase
trEMBLtr|I1SUZ1|I1SUZ1_CICAR0Nodule-enhanced sucrose synthase {ECO:0000313|EMBL:AEE60913.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005193884843894+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00695E2.4.1.13 EC:2.4.1.13 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005985  sucrose metabolic process

GO:0009058  biosynthetic process


molecular_function

GO:0016157  sucrose synthase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000519s00019093.2PF00862.14Sucrose_synth75540
Glyur000519s00019093.2PF00534.15Glycos_transf_15647313.70E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2698.448
SRR1783600control2696.244
SRR1783602moderate drought stress1654.725
SRR1811619moderate drought stress1642.355

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1448.838
DRR006520Root Summer glycyrrhizin high producing strain1430.921
DRR006521Root Winter glycyrrhizin high producing strain126.500
DRR006522Root Winter glycyrrhizin high producing strain122.749
DRR006523Root Summer glycyrrhizin low producing strain711.715
DRR006524Root Summer glycyrrhizin low producing strain710.199
DRR006525Leaf Summer glycyrrhizin high producing strain54.541
DRR006526Leaf Summer glycyrrhizin high producing strain53.965

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1393.355
SRR2868004Drought Stress(Tissue:root)1309.387
SRR2967015Control (Tissue:root)1320.300

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave78.851
SRR9715740Leave16.958
SRR9715741Leave40.648
SRR9715739Root1779.828
SRR9715742Root2677.721
SRR9715743Root2477.707

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h688.005
SRR8749028MeJA induced 9h1393.444
SRR8749029MeJA induced 9h866.582
SRR8749030Uninduced522.394
SRR8749031Uninduced1052.794
SRR8749032Uninduced759.720

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2172.717
SRR8400027Control-Root2166.781

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved