Gene detail information of Glyur000519s00019106.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G19250.1 | 0 | flavin-dependent monooxygenase 1 |
| NR | XP_003541317.1 | 0 | PREDICTED: probable flavin-containing monooxygenase 1-like [Glycine max] |
| COG | YP_007059321.1 | 3.00E-63 | K+ transport protein [Rivularia sp. PCC 7116] |
| Swissprot | tr|Q9LMA1|FMO1_ARATH | 0 | Probable flavin-containing monooxygenase 1 |
| trEMBL | tr|I1LY93|I1LY93_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G17340.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00519 | 104631 | 109946 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00485 | FMO | EC:1.14.13.8 | Drug metabolism - cytochrome P450 | map00982 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000519s00019106.1 | PF00743.14 | FMO-like | 16 | 483 | 1.50E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.024 |
| SRR1783602 | moderate drought stress | 0.049 |
| SRR1811619 | moderate drought stress | 0.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.141 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.105 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.288 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.906 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.242 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.167 |
| SRR2967015 | Control (Tissue:root) | 0.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.318 |
| SRR9715740 | Leave | 0.205 |
| SRR9715741 | Leave | 0.152 |
| SRR9715739 | Root | 0.002 |
| SRR9715742 | Root | 0.017 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.014 |
| SRR8749028 | MeJA induced 9h | 0.211 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.091 |
| SRR8400027 | Control-Root | 0.067 |