Gene detail information of Glyur000521s00021478.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G26110.16.00E-110Protein kinase superfamily protein
NRAFK43812.15.97E-153unknown [Lotus japonicus]
COGNP_341967.12.00E-40O-sialoglycoprotein endopeptidase [Sulfolobus solfataricus P2]
trEMBLtr|I3SU70|I3SU70_LOTJA2.00E-153Uncharacterized protein {ECO:0000313|EMBL:AFK43812.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005213926242050+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.4.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000521s00021478.1PF00069.20Pkinase151622.30E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.558
SRR1783600control8.516
SRR1783602moderate drought stress8.598
SRR1811619moderate drought stress8.523

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.946
DRR006520Root Summer glycyrrhizin high producing strain17.843
DRR006521Root Winter glycyrrhizin high producing strain6.597
DRR006522Root Winter glycyrrhizin high producing strain6.571
DRR006523Root Summer glycyrrhizin low producing strain3.139
DRR006524Root Summer glycyrrhizin low producing strain3.457
DRR006525Leaf Summer glycyrrhizin high producing strain28.232
DRR006526Leaf Summer glycyrrhizin high producing strain28.220

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)31.743
SRR2868004Drought Stress(Tissue:root)37.995
SRR2967015Control (Tissue:root)30.378

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave36.043
SRR9715740Leave42.591
SRR9715741Leave38.803
SRR9715739Root9.284
SRR9715742Root13.735
SRR9715743Root14.102

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.074
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.149
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.055

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.979
SRR8400027Control-Root36.168

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved