Gene detail information of Glyur000521s00021483.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G38470.12.00E-25WRKY DNA-binding protein 33
NRKHN02122.11.68E-93Putative WRKY transcription factor 33 [Glycine soja]
Swissprottr|Q9C5T3|WRK26_ARATH6.00E-33Probable WRKY transcription factor 26
trEMBLtr|K7MQ56|K7MQ56_SOYBN6.00E-94Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G06360.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005216576967987+


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000521s00021483.1PF03106.10WRKY1161671.60E-26
Glyur000521s00021483.1PF03106.10WRKY2132373.40E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.730
SRR1783600control10.447
SRR1783602moderate drought stress14.493
SRR1811619moderate drought stress14.108

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.713
DRR006520Root Summer glycyrrhizin high producing strain10.226
DRR006521Root Winter glycyrrhizin high producing strain11.181
DRR006522Root Winter glycyrrhizin high producing strain9.412
DRR006523Root Summer glycyrrhizin low producing strain44.543
DRR006524Root Summer glycyrrhizin low producing strain47.816
DRR006525Leaf Summer glycyrrhizin high producing strain14.054
DRR006526Leaf Summer glycyrrhizin high producing strain13.727

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.751
SRR2868004Drought Stress(Tissue:root)83.194
SRR2967015Control (Tissue:root)72.908

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave53.504
SRR9715740Leave33.053
SRR9715741Leave76.452
SRR9715739Root12.990
SRR9715742Root19.870
SRR9715743Root17.415

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h130.575
SRR8749028MeJA induced 9h440.806
SRR8749029MeJA induced 9h297.182
SRR8749030Uninduced314.826
SRR8749031Uninduced393.061
SRR8749032Uninduced236.085

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root45.864
SRR8400027Control-Root42.468

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved