Gene detail information of Glyur000521s00021497.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G30200.13.00E-161catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding
NRXP_004500316.10PREDICTED: malonyl-CoA-acyl carrier protein transacylase, mitochondrial-like [Cicer arietinum]
COGYP_003370260.19.00E-103malonyl CoA-acyl carrier protein transacylase [Pirellula staleyi DSM 6068]
trEMBLtr|G7J0N6|G7J0N6_MEDTR0Malonyl CoA-acyl carrier transacylase {ECO:0000313|EMBL:AES69554.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00521144254148403-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00645fabD EC:2.3.1.39 Fatty acid metabolism map01212
Fatty acid biosynthesismap00061


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004314  [acyl-carrier-protein] S-malonyltransferase activity

GO:0016740  transferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000521s00021497.1PF00698.16Acyl_transf_1963732.20E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control42.905
SRR1783600control43.124
SRR1783602moderate drought stress22.493
SRR1811619moderate drought stress22.162

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain31.683
DRR006520Root Summer glycyrrhizin high producing strain31.173
DRR006521Root Winter glycyrrhizin high producing strain10.560
DRR006522Root Winter glycyrrhizin high producing strain10.566
DRR006523Root Summer glycyrrhizin low producing strain22.134
DRR006524Root Summer glycyrrhizin low producing strain22.216
DRR006525Leaf Summer glycyrrhizin high producing strain33.903
DRR006526Leaf Summer glycyrrhizin high producing strain33.759

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)63.899
SRR2868004Drought Stress(Tissue:root)31.147
SRR2967015Control (Tissue:root)29.807

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.677
SRR9715740Leave22.682
SRR9715741Leave18.777
SRR9715739Root14.525
SRR9715742Root21.892
SRR9715743Root20.038

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.570
SRR8749028MeJA induced 9h13.707
SRR8749029MeJA induced 9h8.194
SRR8749030Uninduced16.566
SRR8749031Uninduced5.543
SRR8749032Uninduced2.798

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root66.323
SRR8400027Control-Root69.194

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved