Gene detail

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Gene detail information of Glyur000521s00021498.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G30140.2	1.00E-68	UDP-Glycosyltransferase superfamily protein
NR	XP_004500315.1	3.96E-156	PREDICTED: UDP-glycosyltransferase 87A2-like [Cicer arietinum]
COG	YP_001709036.1	3.00E-06	glycosyl transferase [Clavibacter michiganensis subsp. sepedonicus]
Swissprot	tr\|O64733\|U87A2_ARATH	3.00E-79	UDP-glycosyltransferase 87A2
trEMBL	tr\|G7J0P1\|G7J0P1_MEDTR	9.00E-156	UDP-glucosyltransferase family protein {ECO:0000313\|EMBL:AES69559.1}

Sequence

Transcript Sequence

>Glyur000521s00021498.1
AAACCGAGGGGTGGTGGCGGAGGAGAGAGGAGGAGGGGAAAGGAGGTGGGTAGTGGTGGAGGAGAGAGGAGGAGGGAAAAGGAGGAGAGAGAGGGGGGTGGTGGTGGTGGAGGGGGGAGAAGGAGGGGGAAGCCATTAGAGGAGGAAGAGGTAGGTGAAAATGGAGAAAAACTTGTAGATTATATTCCAGCAACTTCCTGGGTTCGTCTAGCAGATATTCCTCTTCTTGATAGGAACAATCGTCAAATGTTGCAATGGGCTCTGAAAAGTTGTCAATGGATTCACAAAGCACAGTACCTGTTATTGCCTTCAATTTATGAGCTCGAACCCAAGGTAATTGATGCCTTAAAGGCAAGGCTCACAATACCAATTTACACAATTGGCCCAAACATACCTTACTTCAATCTAGGACACAAGCCATGTTATAATCCAAGTGCTGCTAATAATGGTGCTGGCAAAAGTTACATGGATTGGCTAGATCACCAACCCTGTGGTTCTGTTCTGTACATCTCATATGGCAGTTTTCTCTCTGTTTCAAAAGCACAAATGGATGAAATTGCTGCTGCTTTGCACGATAGTGGCATTCGGTTCTTGTGGGTGACACGTGGGGAGACATGTAGACTGAAAGAAGAGGTGTGTGGTGGGAACAACAACATGGGATTGGTTGTGGCATGGTGTGACCAATTGAGGGTGTTGTTACATCCTGCTGTTGGGGGTTATTGGACACACTGTGGTTGGAATTCTGTCATAGAAGGTGTCTTTGCTGGGGTTCCTTTTTTGACCTTCCCACTTGCTATGGACCAACCACTGATTAGTAGGATCATAGTTGAGGATTGGAAGGTTGGGTGGAGGGTTAAGAAAGATGACAAGTTGGACACTTTGGTGACAAGAGAGGAGATTGTTGTGCTGCTTGGGAGGTTCATGCAGTTGGATGATTCTGACGTAGGAAGAGATGTGGGAAAAAGAGCCAAAGAGCTTCAGCATATAGCTCAGCTGGCAATTAAGAAAGAAGGACCAAACAGACTACAAGCTCAAGCTCGTATTGAGAATCTAAATTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00521	149365	151182	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000521s00021498.1	PF00201.13	UDPGT	159	275	1.60E-19

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.112
SRR1783600	control	1.152
SRR1783602	moderate drought stress	1.514
SRR1811619	moderate drought stress	1.439

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.306
DRR006520	Root Summer glycyrrhizin high producing strain	0.362
DRR006521	Root Winter glycyrrhizin high producing strain	0.949
DRR006522	Root Winter glycyrrhizin high producing strain	0.779
DRR006523	Root Summer glycyrrhizin low producing strain	0.732
DRR006524	Root Summer glycyrrhizin low producing strain	0.583
DRR006525	Leaf Summer glycyrrhizin high producing strain	21.162
DRR006526	Leaf Summer glycyrrhizin high producing strain	21.948

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.066
SRR2868004	Drought Stress(Tissue:root)	0.323
SRR2967015	Control (Tissue:root)	0.097

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	12.258
SRR9715740	Leave	29.956
SRR9715741	Leave	10.840
SRR9715739	Root	0.397
SRR9715742	Root	0.607
SRR9715743	Root	0.884

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.056
SRR8749032	Uninduced	0.058

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.304
SRR8400027	Control-Root	0.017