Gene detail information of Glyur000523s00021970.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49010.1 | 1.00E-51 | Duplicated homeodomain-like superfamily protein |
| NR | KHN10414.1 | 6.96E-167 | Transcription factor MYB1R1 [Glycine soja] |
| Swissprot | tr|Q8S9H7|DIV_ANTMA | 7.00E-56 | Transcription factor DIVARICATA |
| trEMBL | tr|I1MUF9|I1MUF9_SOYBN | 3.00E-167 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G13010.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00523 | 12205 | 13770 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000523s00021970.1 | PF00249.26 | Myb_DNA-binding | 9 | 58 | 1.00E-06 |
| Glyur000523s00021970.1 | PF00249.26 | Myb_DNA-binding | 138 | 182 | 6.90E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.947 |
| SRR1783600 | control | 28.194 |
| SRR1783602 | moderate drought stress | 32.503 |
| SRR1811619 | moderate drought stress | 31.617 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.468 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.657 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.068 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.926 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.276 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.467 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 51.262 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 51.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.428 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.888 |
| SRR2967015 | Control (Tissue:root) | 1.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 8.768 |
| SRR9715740 | Leave | 14.575 |
| SRR9715741 | Leave | 9.987 |
| SRR9715739 | Root | 0.695 |
| SRR9715742 | Root | 4.285 |
| SRR9715743 | Root | 3.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.052 |
| SRR8749028 | MeJA induced 9h | 0.099 |
| SRR8749029 | MeJA induced 9h | 0.090 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 10.583 |
| SRR8400027 | Control-Root | 6.435 |