Gene detail

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Gene detail information of Glyur000524s00019127.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G41970.1	2.00E-160	Protein kinase superfamily protein
NR	XP_003553436.1	0	PREDICTED: probable protein kinase At2g41970-like [Glycine max]
COG	YP_003338481.1	7.00E-20	serine/threonine protein kinase [Streptosporangium roseum DSM 43021]
Swissprot	tr\|P93749\|Y2197_ARATH	0	Probable protein kinase At2g41970
trEMBL	tr\|I1N9B1\|I1N9B1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G33180.1}

Sequence

Transcript Sequence

>Glyur000524s00019127.1
TAACCTTCTATATGAATATAGGCAATGATAGAGGGGAACCAAGGGGCAATGTTACCAAGAGTGGTGCTCCACAGAAAGCATTACCAATTGAGATACCAGTTATATCATTGGATGAGTTAAATAGGTTAACAGGAAACTTTGGTTCGAAGGCTTTTATTGGGGAAGGTTCCTATGGACGGGTTTTCTATGCAAAATTGAGTAATGGTACTGATGCTGCAATTAAGAAGCTAGATACCAGTTCTTCTCAAGAACCTGACTCCGATTTTGCGGCTCAGTTATCAGTTGTTTCAAGACTGAAGCATGATAATTTTGTGGAGTTGATTGGATATTGTCTAGAGGCAGACAACAGAATTTTGGTTTATCAATATGCAAGTTTGGGTTCTTTGCATGACGTATTACATGGAAGGAAAGGTGTACAAGGGGCTGAACCTGGTCCAGTTTTAAGCTGGAACCAGAGAGCAAAAATTGCATTTGGTGCAGCAAAAGGACTCGAGTTTCTTCACGAAAAGGTTCAGCCTTCTATNGTTCATCGCGACGTTAGATCCAGCAATGTCTTACTCTTCAATGACTATGAGGCCAAGATTGCTGATTTCAGCTTGACAAATCAGTCTTCTGACACAGCAGCTAGGCTTCATTCAACAAGAGTCTTGGGAACCTTTGGCTATCATGCTCCAGAGTATGCCATGACAGGGCAGATTACCCAAAAAAGTGATGTCTACAGTTTTGGTGTTGTGCTTTTAGAACTCTTGACAGGAAGAAAGCCAGTAGATCACACAATGCCTAAAGGGCAACAAAGTCTTGTGACTTGGGCAACTCCAAGGTTAAGTGAGGACAAAGTGAAACAATGTGTGGATCCTAAGCTAAACAATGACTACCCGCCAAAGGCAATTGCTAAGTTGGCAGCTGTTGCAGCACTTTGTGTTCAATATGAAGCTGACTTTCGGCCAAACATGACGATTGTTGTCAAAGCTCTCCAGCCACTTCTCAATGCAAAACCAGCTGGTCCTGACTCTAATGCT

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00524	61796	63808	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.2.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006468 protein phosphorylation

GO:0009966 regulation of signal transduction

molecular_function GO:0004672 protein kinase activity GO:0004674 protein serine/threonine kinase activity GO:0004713 protein tyrosine kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000524s00019127.1	PF07714.12	Pkinase_Tyr	48	321	2.70E-46

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.003
SRR2868004	Drought Stress(Tissue:root)	0.049
SRR2967015	Control (Tissue:root)	0.000

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.000
SRR9715740	Leave	0.000
SRR9715741	Leave	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.000

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.002

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.074
SRR8400027	Control-Root	0.167