Gene detail information of Glyur000526s00034276.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G54590.22.00E-51Protein kinase superfamily protein
NRXP_010062949.11.82E-79PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730 [Eucalyptus grandis]
Swissprottr|Q9LFV3|Y5157_ARATH3.00E-17Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730
trEMBLtr|A0A059BVG2|A0A059BVG2_EUCGR7.00E-80Uncharacterized protein {ECO:0000313|EMBL:KCW70107.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005264534646388-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.3.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000526s00034276.1PF07714.12Pkinase_Tyr1061553.20E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.770
SRR1783600control1.499
SRR1783602moderate drought stress1.582
SRR1811619moderate drought stress1.278

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.814
DRR006520Root Summer glycyrrhizin high producing strain2.688
DRR006521Root Winter glycyrrhizin high producing strain4.595
DRR006522Root Winter glycyrrhizin high producing strain4.483
DRR006523Root Summer glycyrrhizin low producing strain3.782
DRR006524Root Summer glycyrrhizin low producing strain2.973
DRR006525Leaf Summer glycyrrhizin high producing strain1.216
DRR006526Leaf Summer glycyrrhizin high producing strain1.737

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.415
SRR2868004Drought Stress(Tissue:root)0.184
SRR2967015Control (Tissue:root)0.226

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.966
SRR9715740Leave0.189
SRR9715741Leave1.079
SRR9715739Root0.112
SRR9715742Root1.069
SRR9715743Root0.812

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.120
SRR8749028MeJA induced 9h0.744
SRR8749029MeJA induced 9h0.249
SRR8749030Uninduced0.620
SRR8749031Uninduced0.701
SRR8749032Uninduced4.366

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.262
SRR8400027Control-Root1.196

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved