Gene detail information of Glyur000526s00034281.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42200.1 | 7.00E-31 | squamosa promoter binding protein-like 9 |
| NR | XP_004513942.1 | 5.13E-119 | PREDICTED: squamosa promoter-binding-like protein 7-like [Cicer arietinum] |
| Swissprot | tr|Q7XT42|SPL7_ORYSJ | 4.00E-48 | Squamosa promoter-binding-like protein 7 |
| trEMBL | tr|A0A072TXZ6|A0A072TXZ6_MEDTR | 4.00E-107 | Squamosa promoter-binding-like protein {ECO:0000313|EMBL:KEH22349.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00526 | 142937 | 146956 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | SBP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000526s00034281.1 | PF03110.9 | SBP | 108 | 185 | 1.60E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.233 |
| SRR1783600 | control | 0.227 |
| SRR1783602 | moderate drought stress | 0.042 |
| SRR1811619 | moderate drought stress | 0.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.321 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.722 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.031 |
| SRR2967015 | Control (Tissue:root) | 0.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.582 |
| SRR9715740 | Leave | 0.587 |
| SRR9715741 | Leave | 0.466 |
| SRR9715739 | Root | 0.106 |
| SRR9715742 | Root | 0.639 |
| SRR9715743 | Root | 0.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.197 |
| SRR8400027 | Control-Root | 0.985 |