Gene detail information of Glyur000527s00032549.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G01060.1 | 2.00E-40 | myb-like HTH transcriptional regulator family protein |
| NR | KEH23173.1 | 1.24E-124 | myb-like transcription factor family protein [Medicago truncatula] |
| Swissprot | tr|Q8GUN5|PHL1_ARATH | 1.00E-35 | Protein PHR1-LIKE 1 |
| trEMBL | tr|A0A072U1W8|A0A072U1W8_MEDTR | 5.00E-125 | Myb-like transcription factor family protein {ECO:0000313|EMBL:KEH23173.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00527 | 76930 | 81010 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000527s00032549.1 | PF00249.26 | Myb_DNA-binding | 16 | 70 | 4.20E-12 |
| Glyur000527s00032549.1 | PF14379.1 | Myb_CC_LHEQLE | 102 | 142 | 3.80E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.743 |
| SRR1783600 | control | 0.756 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.126 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.246 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.030 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.008 |
| SRR9715740 | Leave | 0.130 |
| SRR9715741 | Leave | 0.146 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.028 |
| SRR8749028 | MeJA induced 9h | 0.024 |
| SRR8749029 | MeJA induced 9h | 0.053 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.210 |
| SRR8749032 | Uninduced | 0.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.212 |
| SRR8400027 | Control-Root | 0.000 |