Gene detail information of Glyur000528s00024905.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G19450.1 | 0 | membrane bound O-acyl transferase (MBOAT) family protein |
| NR | XP_004513436.1 | 0 | PREDICTED: diacylglycerol O-acyltransferase 1-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q9SLD2|DGAT1_ARATH | 0 | Diacylglycerol O-acyltransferase 1 |
| trEMBL | tr|K7LC66|K7LC66_SOYBN | 0 | O-acyltransferase {ECO:0000256|PIRNR:PIRNR000439} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00528 | 125466 | 137137 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K11155 | DGAT1 | EC:2.3.1.20 2.3.1.75 2.3.1.76 | Glycerolipid metabolism | map00561 |
| Retinol metabolism | map00830 | |||
| Fat digestion and absorption | map04975 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000528s00024905.1 | PF03062.14 | MBOAT | 242 | 498 | 1.60E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.668 |
| SRR1783600 | control | 3.726 |
| SRR1783602 | moderate drought stress | 2.550 |
| SRR1811619 | moderate drought stress | 2.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.174 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.434 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.081 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.058 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.820 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.975 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.071 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.058 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.572 |
| SRR2967015 | Control (Tissue:root) | 6.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.902 |
| SRR9715740 | Leave | 2.577 |
| SRR9715741 | Leave | 1.976 |
| SRR9715739 | Root | 3.460 |
| SRR9715742 | Root | 3.068 |
| SRR9715743 | Root | 3.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.488 |
| SRR8749028 | MeJA induced 9h | 4.262 |
| SRR8749029 | MeJA induced 9h | 3.958 |
| SRR8749030 | Uninduced | 2.094 |
| SRR8749031 | Uninduced | 1.711 |
| SRR8749032 | Uninduced | 2.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.853 |
| SRR8400027 | Control-Root | 10.351 |