Gene detail information of Glyur000529s00019341.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G52030.21.00E-107TraB family protein
NRXP_006589563.10PREDICTED: traB domain-containing protein-like isoform X2 [Glycine max]
COGYP_005269043.11.00E-19hypothetical protein Awo_c13700 [Acetobacterium woodii DSM 1030]
Swissprottr|P59468|LBD24_ARATH3.00E-47LOB domain-containing protein 24
trEMBLtr|K7LL49|K7LL49_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G38410.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005293456439664-


Gene family

Gene familysubfamily
Transcription Factors FamilyLOB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000529s00019341.4PF03195.9DUF260341331.20E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.364
SRR1783600control1.383
SRR1783602moderate drought stress2.403
SRR1811619moderate drought stress2.273

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.988
DRR006520Root Summer glycyrrhizin high producing strain3.295
DRR006521Root Winter glycyrrhizin high producing strain6.797
DRR006522Root Winter glycyrrhizin high producing strain6.345
DRR006523Root Summer glycyrrhizin low producing strain6.187
DRR006524Root Summer glycyrrhizin low producing strain6.204
DRR006525Leaf Summer glycyrrhizin high producing strain19.407
DRR006526Leaf Summer glycyrrhizin high producing strain19.426

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.315
SRR2868004Drought Stress(Tissue:root)3.167
SRR2967015Control (Tissue:root)3.032

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.492
SRR9715740Leave29.540
SRR9715741Leave15.244
SRR9715739Root0.652
SRR9715742Root1.705
SRR9715743Root1.440

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.912
SRR8749028MeJA induced 9h7.285
SRR8749029MeJA induced 9h3.529
SRR8749030Uninduced7.730
SRR8749031Uninduced7.510
SRR8749032Uninduced6.056

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.564
SRR8400027Control-Root2.834

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved