Gene detail information of Glyur000529s00019342.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G52020.11.00E-24Integrase-type DNA-binding superfamily protein
NRAES62568.23.04E-53ethylene-responsive transcription factor ERF026 [Medicago truncatula]
Swissprottr|Q9FJ90|ERF25_ARATH1.00E-33Ethylene-responsive transcription factor ERF025
trEMBLtr|G7IBZ9|G7IBZ9_MEDTR1.00E-53Ethylene-responsive transcription factor ERF026 {ECO:0000313|EMBL:AES62568.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005294539948308+


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000529s00019342.1PF00847.15AP240831.10E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.267
SRR1783600control1.080
SRR1783602moderate drought stress2.319
SRR1811619moderate drought stress1.959

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.950
DRR006520Root Summer glycyrrhizin high producing strain4.551
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain24.906
DRR006524Root Summer glycyrrhizin low producing strain25.745
DRR006525Leaf Summer glycyrrhizin high producing strain10.874
DRR006526Leaf Summer glycyrrhizin high producing strain10.643

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.793
SRR2868004Drought Stress(Tissue:root)3.372
SRR2967015Control (Tissue:root)2.038

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave100.182
SRR9715740Leave42.350
SRR9715741Leave53.475
SRR9715739Root55.430
SRR9715742Root112.972
SRR9715743Root88.603

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.475
SRR8749028MeJA induced 9h23.873
SRR8749029MeJA induced 9h15.186
SRR8749030Uninduced14.875
SRR8749031Uninduced4.484
SRR8749032Uninduced7.795

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.950
SRR8400027Control-Root2.728

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved