Gene detail information of Glyur000529s00019343.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G51990.14.00E-45C-repeat-binding factor 4
NRADL74429.19.18E-93CRT/DRE binding factor 4 [Medicago truncatula]
Swissprottr|Q9FJ93|DRE1D_ARATH4.00E-63Dehydration-responsive element-binding protein 1D
trEMBLtr|E1AXT3|E1AXT3_MEDTR3.00E-93CRT/DRE binding factor 4 {ECO:0000313|EMBL:ADL74429.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005295881159434+


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000529s00019343.1PF00847.15AP245958.50E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.151
SRR1783600control0.106
SRR1783602moderate drought stress0.424
SRR1811619moderate drought stress0.506

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain416.874
DRR006520Root Summer glycyrrhizin high producing strain415.205
DRR006521Root Winter glycyrrhizin high producing strain2.891
DRR006522Root Winter glycyrrhizin high producing strain2.891
DRR006523Root Summer glycyrrhizin low producing strain1371.584
DRR006524Root Summer glycyrrhizin low producing strain1357.484
DRR006525Leaf Summer glycyrrhizin high producing strain59.823
DRR006526Leaf Summer glycyrrhizin high producing strain60.059

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.830
SRR2868004Drought Stress(Tissue:root)16.698
SRR2967015Control (Tissue:root)156.460

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave856.772
SRR9715740Leave492.867
SRR9715741Leave715.403
SRR9715739Root1253.140
SRR9715742Root1740.154
SRR9715743Root1696.981

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h513.414
SRR8749028MeJA induced 9h495.854
SRR8749029MeJA induced 9h298.572
SRR8749030Uninduced456.561
SRR8749031Uninduced125.238
SRR8749032Uninduced211.459

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.698
SRR8400027Control-Root60.797

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved