Gene detail information of Glyur000529s00019345.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G12580.12.00E-136phosphoenolpyruvate carboxylase-related kinase 1
NRXP_004496616.10PREDICTED: calcium-dependent protein kinase 4-like [Cicer arietinum]
COGYP_007162414.15.00E-29serine/threonine protein kinase [Cyanobacterium aponinum PCC 10605]
Swissprottr|A5A7I7|CDPK4_SOLTU3.00E-91Calcium-dependent protein kinase 4
trEMBLtr|G7IC06|G7IC06_MEDTR0Calcium-dependent kinase {ECO:0000313|EMBL:AES62575.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005297188477141-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000529s00019345.3PF00069.20Pkinase422992.40E-69


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.913
SRR1783600control7.917
SRR1783602moderate drought stress10.665
SRR1811619moderate drought stress10.600

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.822
DRR006520Root Summer glycyrrhizin high producing strain12.495
DRR006521Root Winter glycyrrhizin high producing strain40.460
DRR006522Root Winter glycyrrhizin high producing strain37.964
DRR006523Root Summer glycyrrhizin low producing strain16.478
DRR006524Root Summer glycyrrhizin low producing strain16.424
DRR006525Leaf Summer glycyrrhizin high producing strain6.493
DRR006526Leaf Summer glycyrrhizin high producing strain6.226

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.064
SRR2868004Drought Stress(Tissue:root)28.034
SRR2967015Control (Tissue:root)36.367

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.267
SRR9715740Leave21.611
SRR9715741Leave30.467
SRR9715739Root9.203
SRR9715742Root17.737
SRR9715743Root16.559

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.102
SRR8749028MeJA induced 9h20.816
SRR8749029MeJA induced 9h12.439
SRR8749030Uninduced16.871
SRR8749031Uninduced16.908
SRR8749032Uninduced17.286

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.657
SRR8400027Control-Root23.366

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved