Gene detail information of Glyur000529s00019355.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G51890.11.00E-132Peroxidase superfamily protein
NRXP_003592341.10Peroxidase [Medicago truncatula]
Swissprottr|Q9LT91|PER66_ARATH4.00E-169Peroxidase 66 (Precursor)
trEMBLtr|G7IC23|G7IC23_MEDTR0Uncharacterized protein {ECO:0000313|EMBL:AFK46249.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00529113783116611+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000529s00019355.1PF00141.18peroxidase512881.10E-73


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.769
SRR1783600control2.949
SRR1783602moderate drought stress2.293
SRR1811619moderate drought stress2.282

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.526
DRR006520Root Summer glycyrrhizin high producing strain5.593
DRR006521Root Winter glycyrrhizin high producing strain3.634
DRR006522Root Winter glycyrrhizin high producing strain3.400
DRR006523Root Summer glycyrrhizin low producing strain6.708
DRR006524Root Summer glycyrrhizin low producing strain6.880
DRR006525Leaf Summer glycyrrhizin high producing strain3.326
DRR006526Leaf Summer glycyrrhizin high producing strain3.300

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.250
SRR2868004Drought Stress(Tissue:root)2.957
SRR2967015Control (Tissue:root)2.822

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.370
SRR9715740Leave0.478
SRR9715741Leave1.194
SRR9715739Root0.220
SRR9715742Root2.130
SRR9715743Root1.251

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.986
SRR8749028MeJA induced 9h0.805
SRR8749029MeJA induced 9h2.059
SRR8749030Uninduced2.659
SRR8749031Uninduced1.820
SRR8749032Uninduced1.566

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.416
SRR8400027Control-Root1.638

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved