Gene detail information of Glyur000529s00019361.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G51830.12.00E-138pfkB-like carbohydrate kinase family protein
NRXP_003555364.20PREDICTED: putative fructokinase-5-like [Glycine max]
COGYP_002521328.13.00E-102putative fructokinase [Thermomicrobium roseum DSM 5159]
Swissprottr|Q9FLH8|SCRK7_ARATH0Probable fructokinase-7
trEMBLtr|I1NGN6|I1NGN6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G29270.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00529140998143449-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00847E2.7.1.4, scrK EC:2.7.1.4 Fructose and mannose metabolism map00051
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0006014  D-ribose metabolic process


molecular_function

GO:0004747  ribokinase activity

GO:0016773  phosphotransferase activity, alcohol group as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000529s00019361.1PF00294.19PfkB193457.20E-70


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.465
SRR1783600control0.476
SRR1783602moderate drought stress0.367
SRR1811619moderate drought stress0.349

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.364
DRR006520Root Summer glycyrrhizin high producing strain3.522
DRR006521Root Winter glycyrrhizin high producing strain1.541
DRR006522Root Winter glycyrrhizin high producing strain1.402
DRR006523Root Summer glycyrrhizin low producing strain2.718
DRR006524Root Summer glycyrrhizin low producing strain2.942
DRR006525Leaf Summer glycyrrhizin high producing strain0.144
DRR006526Leaf Summer glycyrrhizin high producing strain0.142

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.995
SRR2868004Drought Stress(Tissue:root)4.504
SRR2967015Control (Tissue:root)5.572

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.231
SRR9715740Leave0.193
SRR9715741Leave0.151
SRR9715739Root0.471
SRR9715742Root0.645
SRR9715743Root0.618

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.827
SRR8749028MeJA induced 9h10.306
SRR8749029MeJA induced 9h9.714
SRR8749030Uninduced21.561
SRR8749031Uninduced12.121
SRR8749032Uninduced12.309

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.814
SRR8400027Control-Root2.720

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved