Gene detail

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Gene detail information of Glyur000530s00038850.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G52400.1	2.00E-150	cytochrome P450, family 715, subfamily A, polypeptide 1
NR	KEH42422.1	0	cytochrome P450 family 72 protein [Medicago truncatula]
COG	YP_007066645.1	2.00E-40	monooxygenase [Calothrix sp. PCC 7507]
Swissprot	tr\|O48786\|C734A_ARATH	3.00E-90	Cytochrome P450 734A1
trEMBL	tr\|A0A072VKW1\|A0A072VKW1_MEDTR	0	Cytochrome P450 family 72 protein {ECO:0000313\|EMBL:KEH42422.1}

Sequence

Transcript Sequence

>Glyur000530s00038850.1
ATGGGGATGTTGGTGCTACCTGGGGCACTTGCCTTGTTGGCAACAATACTAGCTCTCTTCTTCTTCTTCTTGCTCTTGAAACTAATGTATTCTTGGTGGGTTTCACCTATCCAAACACATCACAAGCTTCAAAGATGTGGGTTTGGAGGACCACCCCCAAGTTTTCCACTTGGAAACATTCAAGAGATGAAGAAGAAGAGTAGCCTAGTTAATTCTTCGAATTCACTTATTGGCTCCTTAAAGCTCAGTACCCATGATATACACTCCACTGTGTTCCCCTATTTTTCTCGGTGGCAAAATTCTCACGGGAAGGTTTTCATATACTGGCTCGGCACAGAACCCTTTCTGTACATTGCAGACCCAGAATTCTTGAAGAAAATGTCCNCAGAAGTGATAGCCAAGAGATGGGGGAAACCAAATGTATTTAGAAATGATAGAATCCCCATGTTTGGGAAAGGTTTGGTTATGNCTGAAGGCAATGAATGGGTTCATCATAGGCATGTTATAGCCCCAACATTTTCTCCCCTTAACTTGAAGGCAATGGCAAGCATGATGGTAGAATCTACAAACCAGATGATGGATAGATGGATCACCCAAATTAACTCCGGAAACCCGGAAATCGATGTGGAAAGGGAGGTTATTGCAATCGCGGGAGAGATCATAGCAAGAACAAGCTTTGGCATGAAGGGAGAAAATGCAAGGAAAGTGTGTGAGAAACTAAGGGCACTACAAATGACACTTTTCAAGACAACAAGATATGTTGGGGTTCCATATAGCAAGTGTTTCGACATCAAGAAAACCATAGAGGCCAAGAAACTTGGGAAGGAGATTGATAGTCTATTGTTGAGTGTCATAAGGGCTCGCAAACAATCAAACATGATGAAGAGAGGGCCAACTAGAGAAGACTTGCTAGATTTGTTGTTACAAGAGAATCAATTAGGTGATGGCAATAAGTTTGGGAAGAGATTGAGCACAAGGCAATTGGTGGATGAGTCAAAGACTTTCTTCTTTGCTGGCCATGAGACAACAGCATTGGCTATCTCGTGGACTTTGTTGCTTCTAGCTATGCATGAAGATTGGCAAATTCAATTGAGAGATGAGATAAGAGAAGTGGTCGGTGATAAAGAAGTAGTTGACATCAATGTCCTAGCTGGGCTGAAAAAGGACATTCATGTTGACAACTTAATGGTGCCTAATGGGACNAACATGTGGATCGATGTTGTGGCGATGCACCACGACCAAACATTGTGGGGGAAAGATGTGAATGAGTTTAGACCAGAGAGGTTCATGGATGATGTAAATGGTGGATGCAACCACAAGATGGGGTACTTGCCTTTTGGGTTTGGAGGNAGAATGTGTGTTGGTAGAAACTTGAGCTTTATGGAGTATAAGATAGTGTTAACCCTACTTCTCTCTAGGTTTAGCTTTAAACTTTCCCCTAATTATGTCCATTCACCTTCTATCATGCTCTCCTTGAGGCCCGCTTATGGACTCCCTCTTATAGTTCAGCCNCTTTGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00530	102715	107707	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP715A1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000530s00038850.1	PF00067.17	p450	76	382	5.50E-39
Glyur000530s00038850.1	PF00067.17	p450	386	481	6.40E-26

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.081
SRR1783600	control	0.077
SRR1783602	moderate drought stress	0.025
SRR1811619	moderate drought stress	0.025

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.058
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.017

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.536
SRR2868004	Drought Stress(Tissue:root)	0.261
SRR2967015	Control (Tissue:root)	0.334

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.778
SRR9715740	Leave	0.498
SRR9715741	Leave	0.519
SRR9715739	Root	0.000
SRR9715742	Root	0.193
SRR9715743	Root	0.303

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.050
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.675
SRR8400027	Control-Root	0.331