Gene detail information of Glyur000532s00020756.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G06250.1 | 0 | FAR1-related sequence 7 |
| NR | XP_003541641.1 | 0 | PREDICTED: protein FAR1-RELATED SEQUENCE 7-like [Glycine max] |
| Swissprot | tr|Q9M8J3|FRS7_ARATH | 0 | Protein FAR1-RELATED SEQUENCE 7 |
| trEMBL | tr|I1M176|I1M176_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G28230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00532 | 50109 | 52996 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | FAR1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000532s00020756.1 | PF03101.10 | FAR1 | 34 | 85 | 4.60E-08 |
| Glyur000532s00020756.1 | PF03101.10 | FAR1 | 164 | 239 | 1.90E-18 |
| Glyur000532s00020756.1 | PF10551.4 | MULE | 318 | 383 | 6.50E-13 |
| Glyur000532s00020756.1 | PF04434.12 | SWIM | 575 | 599 | 4.20E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.328 |
| SRR1783600 | control | 4.248 |
| SRR1783602 | moderate drought stress | 4.437 |
| SRR1811619 | moderate drought stress | 4.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.311 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.349 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.184 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.742 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.295 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.146 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.667 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.196 |
| SRR2868004 | Drought Stress(Tissue:root) | 11.090 |
| SRR2967015 | Control (Tissue:root) | 8.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.769 |
| SRR9715740 | Leave | 2.690 |
| SRR9715741 | Leave | 2.665 |
| SRR9715739 | Root | 1.414 |
| SRR9715742 | Root | 4.158 |
| SRR9715743 | Root | 3.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.758 |
| SRR8749028 | MeJA induced 9h | 9.196 |
| SRR8749029 | MeJA induced 9h | 2.715 |
| SRR8749030 | Uninduced | 4.431 |
| SRR8749031 | Uninduced | 10.018 |
| SRR8749032 | Uninduced | 4.980 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.697 |
| SRR8400027 | Control-Root | 6.021 |