Gene detail information of Glyur000533s00015038.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G59410.10protein kinase family protein
NRXP_004507335.10PREDICTED: probable serine/threonine-protein kinase GCN2-like [Cicer arietinum]
COGYP_004981777.13.00E-23Serine/threonine protein kinase with PASTA sensors [Geobacillus thermoleovorans CCB_US3_UF5]
Swissprottr|Q9LX30|GCN2_ARATH0Probable serine/threonine-protein kinase GCN2
trEMBLtr|A0A072UKV1|A0A072UKV1_MEDTR0Serine/Threonine-kinase GCN2-like protein, putative {ECO:0000313|EMBL:KEH30322.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005334248558497+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K16196EIF2AK4 EC:2.7.11.1 Protein processing in endoplasmic reticulum map04141
Autophagy - animalmap04140
Autophagy - yeastmap04138
Measlesmap05162
Influenza Amap05164
Hepatitis Cmap05160
Herpes simplex infectionmap05168
Epstein-Barr virus infectionmap05169


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000533s00015038.2PF05773.17RWD341474.10E-13
Glyur000533s00015038.2PF00069.20Pkinase4097106.40E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.088
SRR1783600control4.139
SRR1783602moderate drought stress5.220
SRR1811619moderate drought stress5.145

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.132
DRR006520Root Summer glycyrrhizin high producing strain3.976
DRR006521Root Winter glycyrrhizin high producing strain6.533
DRR006522Root Winter glycyrrhizin high producing strain6.438
DRR006523Root Summer glycyrrhizin low producing strain4.523
DRR006524Root Summer glycyrrhizin low producing strain4.400
DRR006525Leaf Summer glycyrrhizin high producing strain3.664
DRR006526Leaf Summer glycyrrhizin high producing strain3.760

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)10.438
SRR2868004Drought Stress(Tissue:root)12.588
SRR2967015Control (Tissue:root)13.266

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.087
SRR9715740Leave5.572
SRR9715741Leave5.215
SRR9715739Root0.663
SRR9715742Root3.797
SRR9715743Root3.168

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.508
SRR8749028MeJA induced 9h17.937
SRR8749029MeJA induced 9h12.363
SRR8749030Uninduced30.300
SRR8749031Uninduced73.262
SRR8749032Uninduced34.883

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.257
SRR8400027Control-Root10.751

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved