Gene detail

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Gene detail information of Glyur000533s00015040.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G59420.1	0	crinkly4
NR	XP_003540697.2	0	PREDICTED: serine/threonine-protein kinase-like protein ACR4-like [Glycine max]
COG	YP_002017974.1	8.00E-21	serine/threonine protein kinase [Pelodictyon phaeoclathratiforme BU-1]
Swissprot	tr\|Q9LX29\|ACR4L_ARATH	0	Serine/threonine-protein kinase-like protein ACR4 (Precursor)
trEMBL	tr\|K7LT62\|K7LT62_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G05630.2}

Sequence

Transcript Sequence

>Glyur000533s00015040.1
ATGATATCTTGGTTGCACCAATGTTCAGCTGGGCTTCTATTTGAACTTGTGGTTTTGTCGTACTTGTGGGTCCCAGTTTGGAGTCTTGGTTCCATGTCATCCATTGCCATCTCTTATGGAGAAAAAGGTTCTGTCTTTTGTGGTTTGAAATCAGATGGGTCTCATACTGTGACCTGTTATGGATCCTCCAACTCAGCCATAATCTATGAGACACCAACCCATTTCTCATTCCTTGGCCTAACTGCTGGGGATGGCTTTGTCTGTGGGATCCTAATGGGTTCCANTCAACCTTACTGTTGGGGTAGCAGTGGCTACATTGAAATGGGTGTGCCTCAACCTATGGTTAAAGGAGCTCAGTACCAAGAAATCAGTGCTGGGGATTACCATGTATGTGGGTTGAGGAAGCCTTTGAATAATGGAAGGCACAAAAACGTTTCTTTGGTTGATTGCTGGGGCTACAACATGACCAACAACTATGTGTTTGATGGAATAGTTCAATCAATCTCAGCTGGTTCTGAATTCAACTGTGGCTTGTTTTCTCACAATAGGACTGTNTTCTGCTGGGGTGATGAGACTAGTAGCCAAGTGATTAGTTTGATTCCTCTACACATGAAGTTCCAGAAGATTTCTGCTGGTGGGTATCATGTGTGTGGAATCTCAGAGGGGATAGTGAATTCTAGAACCTTTTGTTGGGGGAGAAGCTTGGATATTGAGGAACAAATCTCAGTGAGACATGATGCTGGTCAAGGAAATGTTGATTTGGCTCCAAATGACCCCATGGTTTCTGTAGTTGGGGGAAAGTTCCATGCTTGTGGCATAAAGAGCTATGATCATGGAGTGGTTTGTTGGGGCTTTATGATCAAACCAAGCATCCCAGTTCCTAGTGGGATTAAGGTGTTCGAGATTGCAGCTGGGGATTATTTCACTTGTGGAGTGTTTGCTGAGAAATCTCTTATGCCTGTGTGTTGGGGTGTTGGCTTCCCTACCTCTCTCCCTTTAGCTGTTTCACCAAGAATGTGTAAGCCTGCTCCATGCCCTCCTGGTTTCTATGAGATTGATCAGCACAAGGGTCTTTGCAAGTCCCCAAATTCTCATGTTTGCATGGCCTGCAGTGGTGGTGCATGTCCTGCTGAAATGTATCAGAAAAGTGGATGCAATTTGGCATCTGATAGAGTGTGTGAGTACAACTGTTCTGCTTGTTCTTCACCTGAATGCTTCTCAAACTGCTCTTCTTCACATTCCAAAAGTGAAAAATTTTGGGCTTTGCAGTTGCCAGTTGTTATAGGAGAGATTGGTTTTGCAGTTTTTATAGTCAGTGTTGCATCACTAACTGCAGTTTTATATGTTCGCCACAGGCTAAGAGATTGTGAGTGTTCAATGAGGTCAAAGGTGAAGAAGAAATTTAGTGGGAGCTCTTCCCTCCAGAATGAGAACAACAGCAAGATCAGCCCAGAAATGGAGGAGTTCAAGCTTAGGAGGGCTCAAATGTTCACCTTTAAGGAACTTGAAACTGCAACTGGTGGATTCAAAGAAGAATCCATAGTGGGGAAGGGAAGTTTCTCTTGTGTGTTCAAGGGAGTTCTAAAAGATGGGACAGTTGTAGCTGTTAAAAGGGCAATAGTATTTCCCAACATGCAGNAGAATTCCAAAGAGTTCCACACAGAACTTGACTTACTCTCCAGATTAAACCATGCACATTTGCTCAACCTTCTAGGCTATTGTGAGGAAGGTGGAGAAAGGCTACTTGTGTATGAGTTCATGGCTCATGGCTCTTTGCATCAACACCTACATGGGACAAACCAAGTGTTGAGAGAGCAGTTAAACTGGGTAAGAAGGGTAACAATAGCAGTCCAAGCAGCACGTGGAATTGAGTATCTGCATGGCTATGCATGCCCACCAGTGATTCATAGAGACATAAAGTCCTCAAACATCCTCATTGATGAAGAACACAATGCAAGAGTGGCTGATTTTGGTTTGTCATTGTTGGGACCTTCAGGTAGNAGTTCCCCACTTGCTGAGCTACCAGCTGGGACTTTTGGCTATCTTGATCCTGAATACTATAGGCTCCATTACCTCACCACAAAATCTGATGTCTACAGCTTTGGTGTTCTTCTCTTGGAGATTCTAANTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATTGTTGAATGGGCAGTGCCTTTGATCAAGTCAGGAGATATAGCTGCAATTTTGGACCCAGTTCTAAAACCCCCTCCTGATCTTGAAGCATTGAAAAGGATAGCAAATGTGGCTTGTAAGTGTGTGAGGATGAGAGGGAAAGAGAGGCCTTCAATGGACAAAGTAACAACAGCTTTGGAGAGAGCTCTTGCACAGTTAATGGGTAGCCCATGCATTGAGCAACCAATTTTGCCTACTGAGGTGGTTTTGGGGAGTAACAGATTGCACAAGAAATCATCTCAAAGGTCTTCAAATAGGTCTGTTTGTGAAACTGATGTGGCAGAAACTGAGGACCAAAGGTTTGAGTTTAGAGCACCCTCATGGATAACTTTCCCCAGTGTCACTTCTTCTCAGAGGAGAAAGTCATCATCAGTGTCAGAGGCAGATGTTGTTGATGGGAAAGTTGTTGAAGTGAAGGGCTTGGGAAGCAATGTTGGTGGGGGATGTGATGTGTTGAGGAGTCTTGAGGAAGAGATTGGACCTNCTTCTCCACAAGAGAGGCTGTTCTTGCAACACAACTTCTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00533	60096	62828	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.4.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005515 protein binding GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000533s00015040.1	PF07714.12	Pkinase_Tyr	512	781	1.90E-41

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.063
SRR1783600	control	0.049
SRR1783602	moderate drought stress	0.042
SRR1811619	moderate drought stress	0.042

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.040
DRR006520	Root Summer glycyrrhizin high producing strain	0.039
DRR006521	Root Winter glycyrrhizin high producing strain	0.082
DRR006522	Root Winter glycyrrhizin high producing strain	0.080
DRR006523	Root Summer glycyrrhizin low producing strain	0.040
DRR006524	Root Summer glycyrrhizin low producing strain	0.040
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.064
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.057

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.047
SRR2868004	Drought Stress(Tissue:root)	0.051
SRR2967015	Control (Tissue:root)	0.069

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.146
SRR9715740	Leave	0.093
SRR9715741	Leave	0.048
SRR9715739	Root	0.027
SRR9715742	Root	0.068
SRR9715743	Root	0.022

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.026
SRR8749028	MeJA induced 9h	0.025
SRR8749029	MeJA induced 9h	0.171
SRR8749030	Uninduced	0.063
SRR8749031	Uninduced	0.029
SRR8749032	Uninduced	0.037

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.075
SRR8400027	Control-Root	0.094