Gene detail information of Glyur000533s00015048.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G59480.16.00E-79pfkB-like carbohydrate kinase family protein
NRCAD31714.13.51E-111fructokinase-like protein [Cicer arietinum]
COGYP_002774175.13.00E-42fructokinase [Brevibacillus brevis NBRC 100599]
Swissprottr|Q9M1B9|SCRK4_ARATH8.00E-98Probable fructokinase-4
trEMBLtr|Q8LPE5|Q8LPE5_CICAR1.00E-111Fructokinase-like protein {ECO:0000313|EMBL:CAD31714.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005339137893192+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00847E2.7.1.4, scrK EC:2.7.1.4 Fructose and mannose metabolism map00051
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

molecular_function

GO:0016773  phosphotransferase activity, alcohol group as acceptor



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000533s00015048.1PF00294.19PfkB31588.80E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control184.499
SRR1783600control184.304
SRR1783602moderate drought stress121.137
SRR1811619moderate drought stress118.783

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain176.992
DRR006520Root Summer glycyrrhizin high producing strain177.203
DRR006521Root Winter glycyrrhizin high producing strain21.074
DRR006522Root Winter glycyrrhizin high producing strain20.230
DRR006523Root Summer glycyrrhizin low producing strain69.145
DRR006524Root Summer glycyrrhizin low producing strain69.645
DRR006525Leaf Summer glycyrrhizin high producing strain12.789
DRR006526Leaf Summer glycyrrhizin high producing strain12.368

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)126.984
SRR2868004Drought Stress(Tissue:root)105.045
SRR2967015Control (Tissue:root)131.662

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.607
SRR9715740Leave17.818
SRR9715741Leave11.884
SRR9715739Root191.854
SRR9715742Root150.553
SRR9715743Root149.532

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h176.527
SRR8749028MeJA induced 9h79.537
SRR8749029MeJA induced 9h266.413
SRR8749030Uninduced14.628
SRR8749031Uninduced22.473
SRR8749032Uninduced95.662

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root211.866
SRR8400027Control-Root192.154

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved