Gene detail information of Glyur000533s00015049.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G06040.12.00E-79B-box zinc finger family protein
NRAFK36096.19.69E-156unknown [Lotus japonicus]
Swissprottr|Q96288|BBX24_ARATH2.00E-100B-box zinc finger protein 24 {ECO:0000303|PubMed:19920209}
trEMBLtr|I3S754|I3S754_LOTJA4.00E-156Uncharacterized protein {ECO:0000313|EMBL:AFK36096.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005339488697874-


Gene family

Gene familysubfamily
Transcription Factors FamilyOrphans


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005622  intracellular


molecular_function

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000533s00015049.1PF00643.19zf-B_box53867.90E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control39.299
SRR1783600control39.521
SRR1783602moderate drought stress45.746
SRR1811619moderate drought stress45.256

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.815
DRR006520Root Summer glycyrrhizin high producing strain28.474
DRR006521Root Winter glycyrrhizin high producing strain79.909
DRR006522Root Winter glycyrrhizin high producing strain77.853
DRR006523Root Summer glycyrrhizin low producing strain29.678
DRR006524Root Summer glycyrrhizin low producing strain30.333
DRR006525Leaf Summer glycyrrhizin high producing strain214.649
DRR006526Leaf Summer glycyrrhizin high producing strain214.569

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)41.301
SRR2868004Drought Stress(Tissue:root)47.764
SRR2967015Control (Tissue:root)44.776

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave214.288
SRR9715740Leave320.180
SRR9715741Leave228.298
SRR9715739Root34.651
SRR9715742Root49.590
SRR9715743Root43.566

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h94.848
SRR8749028MeJA induced 9h50.594
SRR8749029MeJA induced 9h68.684
SRR8749030Uninduced36.613
SRR8749031Uninduced28.737
SRR8749032Uninduced22.853

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root41.867
SRR8400027Control-Root35.091

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved