Gene detail information of Glyur000534s00028686.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G38280.20AMP deaminase, putative / myoadenylate deaminase, putative
NRXP_004509928.10PREDICTED: AMP deaminase-like [Cicer arietinum]
COGYP_003262760.18.00E-06adenosine deaminase [Halothiobacillus neapolitanus c2]
Swissprottr|O80452|AMPD_ARATH0AMP deaminase
trEMBLtr|I1KXP5|I1KXP5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G40690.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00534136506145988-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01490AMPD EC:3.5.4.6 Purine metabolism map00230


Gene Ontology

biological_process

GO:0009168  purine ribonucleoside monophosphate biosynthetic process

GO:0032264  IMP salvage


molecular_function

GO:0003876  AMP deaminase activity

GO:0019239  deaminase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000534s00028686.1PF00962.17A_deaminase4238281.60E-115


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.497
SRR1783600control16.511
SRR1783602moderate drought stress24.310
SRR1811619moderate drought stress24.163

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.894
DRR006520Root Summer glycyrrhizin high producing strain13.643
DRR006521Root Winter glycyrrhizin high producing strain12.518
DRR006522Root Winter glycyrrhizin high producing strain12.333
DRR006523Root Summer glycyrrhizin low producing strain9.162
DRR006524Root Summer glycyrrhizin low producing strain9.377
DRR006525Leaf Summer glycyrrhizin high producing strain8.467
DRR006526Leaf Summer glycyrrhizin high producing strain8.391

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.472
SRR2868004Drought Stress(Tissue:root)13.885
SRR2967015Control (Tissue:root)14.022

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.446
SRR9715740Leave6.218
SRR9715741Leave8.239
SRR9715739Root2.734
SRR9715742Root14.486
SRR9715743Root12.188

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.139
SRR8749028MeJA induced 9h33.339
SRR8749029MeJA induced 9h12.732
SRR8749030Uninduced3.138
SRR8749031Uninduced1.968
SRR8749032Uninduced3.640

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.314
SRR8400027Control-Root25.298

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved