Gene detail information of Glyur000536s00018932.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G02930.26.00E-71glutathione S-transferase 6
NRBAB70616.11.16E-125glutathione S-transferase [Medicago sativa]
COGYP_008152065.14.00E-37glutathione S-transferase [Sorangium cellulosum So0157-2]
Swissprottr|P30109|GSTF1_TOBAC3.00E-99Glutathione S-transferase PARB
trEMBLtr|Q948X4|Q948X4_MEDSA4.00E-126Glutathione S-transferase {ECO:0000313|EMBL:BAB70616.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00536124904131242-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00799GST, gst EC:2.5.1.18 Glutathione metabolism map00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Chemical carcinogenesismap05204
Fluid shear stress and atherosclerosismap05418
Platinum drug resistancemap01524


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000536s00018932.1PF02798.15GST_N2918.90E-06
Glyur000536s00018932.1PF00043.20GST_C1252157.70E-17
Glyur000536s00018932.1PF02798.15GST_N2563271.00E-18
Glyur000536s00018932.1PF00043.20GST_C3684556.20E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control48.495
SRR1783600control49.214
SRR1783602moderate drought stress26.881
SRR1811619moderate drought stress26.935

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain68.811
DRR006520Root Summer glycyrrhizin high producing strain68.324
DRR006521Root Winter glycyrrhizin high producing strain196.545
DRR006522Root Winter glycyrrhizin high producing strain191.618
DRR006523Root Summer glycyrrhizin low producing strain25.101
DRR006524Root Summer glycyrrhizin low producing strain24.932
DRR006525Leaf Summer glycyrrhizin high producing strain40.206
DRR006526Leaf Summer glycyrrhizin high producing strain40.067

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)221.770
SRR2868004Drought Stress(Tissue:root)295.707
SRR2967015Control (Tissue:root)207.789

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave74.487
SRR9715740Leave34.826
SRR9715741Leave72.426
SRR9715739Root120.772
SRR9715742Root193.259
SRR9715743Root184.598

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h197.279
SRR8749028MeJA induced 9h374.304
SRR8749029MeJA induced 9h293.713
SRR8749030Uninduced1241.869
SRR8749031Uninduced784.557
SRR8749032Uninduced462.853

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root217.936
SRR8400027Control-Root143.736

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved