Gene detail information of Glyur000537s00024608.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G11410.13.00E-106protein phosphatase 2CA
NRKEH34758.10protein phosphatase 2C-like protein [Medicago truncatula]
COGYP_001277807.15.00E-07protein PASTA domain-containing protein [Roseiflexus sp. RS-1]
Swissprottr|Q9LNW3|P2C03_ARATH4.00E-141Protein phosphatase 2C 3
trEMBLtr|A0A072V045|A0A072V045_MEDTR0Protein phosphatase 2C-like protein {ECO:0000313|EMBL:KEH34758.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005374773649888-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14497PP2C EC:3.1.3.16 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0006470  protein dephosphorylation


molecular_function

GO:0003824  catalytic activity

GO:0004722  protein serine/threonine phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000537s00024608.1PF00481.16PP2C1143871.80E-67


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.210
SRR1783600control11.537
SRR1783602moderate drought stress15.079
SRR1811619moderate drought stress14.229

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain348.816
DRR006520Root Summer glycyrrhizin high producing strain346.855
DRR006521Root Winter glycyrrhizin high producing strain193.586
DRR006522Root Winter glycyrrhizin high producing strain189.394
DRR006523Root Summer glycyrrhizin low producing strain331.752
DRR006524Root Summer glycyrrhizin low producing strain331.216
DRR006525Leaf Summer glycyrrhizin high producing strain107.089
DRR006526Leaf Summer glycyrrhizin high producing strain105.955

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.505
SRR2868004Drought Stress(Tissue:root)23.336
SRR2967015Control (Tissue:root)53.855

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave47.326
SRR9715740Leave29.573
SRR9715741Leave43.426
SRR9715739Root166.776
SRR9715742Root222.546
SRR9715743Root206.943

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.268
SRR8749028MeJA induced 9h162.361
SRR8749029MeJA induced 9h53.945
SRR8749030Uninduced18.264
SRR8749031Uninduced11.560
SRR8749032Uninduced31.375

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root61.671
SRR8400027Control-Root99.417

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved