Gene detail information of Glyur000539s00030600.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G19230.10Riboflavin synthase-like superfamily protein
NRXP_004488138.10PREDICTED: respiratory burst oxidase homolog protein E-like isoform X1 [Cicer arietinum]
COGYP_007146260.13.00E-49putative ferric reductase [Cylindrospermum stagnale PCC 7417]
Swissprottr|O81211|RBOHE_ARATH0Respiratory burst oxidase homolog protein E
trEMBLtr|A0A072V7N3|A0A072V7N3_MEDTR0Respiratory burst oxidase-like protein {ECO:0000313|EMBL:KEH37646.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00539124188136504-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13447RBOH EC:1.6.3.- 1.11.1.- MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0005509  calcium ion binding

GO:0016491  oxidoreductase activity

GO:0050664  oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000539s00030600.1PF08414.5NADPH_Ox1462463.00E-37
Glyur000539s00030600.1PF01794.14Ferric_reduct4065601.70E-15
Glyur000539s00030600.1PF08030.7NAD_binding_66878559.30E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.569
SRR1783600control2.621
SRR1783602moderate drought stress1.255
SRR1811619moderate drought stress1.429

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.521
DRR006520Root Summer glycyrrhizin high producing strain0.644
DRR006521Root Winter glycyrrhizin high producing strain0.203
DRR006522Root Winter glycyrrhizin high producing strain0.137
DRR006523Root Summer glycyrrhizin low producing strain0.273
DRR006524Root Summer glycyrrhizin low producing strain0.399
DRR006525Leaf Summer glycyrrhizin high producing strain0.397
DRR006526Leaf Summer glycyrrhizin high producing strain0.369

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.327
SRR2868004Drought Stress(Tissue:root)2.334
SRR2967015Control (Tissue:root)2.381

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.568
SRR9715740Leave0.602
SRR9715741Leave0.162
SRR9715739Root0.646
SRR9715742Root3.159
SRR9715743Root2.694

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.270
SRR8749028MeJA induced 9h0.013
SRR8749029MeJA induced 9h0.037
SRR8749030Uninduced0.024
SRR8749031Uninduced0.033
SRR8749032Uninduced0.047

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.043
SRR8400027Control-Root9.633

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved