Gene detail information of Glyur000540s00023685.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58520.10Protein kinase superfamily protein
NRKEH34381.10Serine/Threonine-kinase DDB-G0267514-like protein, putative [Medicago truncatula]
COGYP_001958461.18.00E-21hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q2MHE4|HT1_ARATH3.00E-37Serine/threonine-protein kinase HT1
trEMBLtr|A0A072UYA6|A0A072UYA6_MEDTR0Serine/Threonine-kinase DDB-G0267514-like protein, putative {ECO:0000313|EMBL:KEH34381.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005409112894986+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000540s00023685.1PF07714.12Pkinase_Tyr3535671.80E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.328
SRR1783600control7.409
SRR1783602moderate drought stress6.940
SRR1811619moderate drought stress6.910

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.811
DRR006520Root Summer glycyrrhizin high producing strain11.575
DRR006521Root Winter glycyrrhizin high producing strain4.664
DRR006522Root Winter glycyrrhizin high producing strain4.555
DRR006523Root Summer glycyrrhizin low producing strain14.783
DRR006524Root Summer glycyrrhizin low producing strain14.575
DRR006525Leaf Summer glycyrrhizin high producing strain4.597
DRR006526Leaf Summer glycyrrhizin high producing strain4.439

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.149
SRR2868004Drought Stress(Tissue:root)18.843
SRR2967015Control (Tissue:root)23.326

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.649
SRR9715740Leave5.092
SRR9715741Leave3.848
SRR9715739Root10.546
SRR9715742Root8.248
SRR9715743Root7.713

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h57.283
SRR8749028MeJA induced 9h90.629
SRR8749029MeJA induced 9h49.634
SRR8749030Uninduced19.294
SRR8749031Uninduced14.255
SRR8749032Uninduced14.834

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.872
SRR8400027Control-Root12.813

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved