Gene detail information of Glyur000540s00023686.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G30110.10ubiquitin-activating enzyme 1
NRXP_004500302.10PREDICTED: ubiquitin-activating enzyme E1 1-like [Cicer arietinum]
COGYP_008797957.13.00E-24ubiquitin-activating enzyme E1-like protein [Candidatus Caldiarchaeum subterraneum]
Swissprottr|P93028|UBE11_ARATH0Ubiquitin-activating enzyme E1 1
trEMBLtr|V7BQF4|V7BQF4_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW18811.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0054098150104148+


Gene family

Gene familysubfamily
Ubiquitin FamilyThiF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03178UBE1, UBA1 EC:6.2.1.45 Ubiquitin mediated proteolysis map04120
Parkinson's diseasemap05012


Gene Ontology

biological_process

GO:0006464  cellular protein modification process


molecular_function

GO:0005524  ATP binding

GO:0008641  small protein activating enzyme activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000540s00023686.1PF00899.16ThiF942073.00E-17
Glyur000540s00023686.1PF00899.16ThiF4906326.10E-36
Glyur000540s00023686.1PF10585.4UBA_e1_thiolCys6356784.50E-18
Glyur000540s00023686.1PF02134.16UBACT7778368.00E-06
Glyur000540s00023686.1PF02134.16UBACT8779438.20E-22
Glyur000540s00023686.1PF09358.5UBA_e1_C95110739.20E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control45.759
SRR1783600control46.002
SRR1783602moderate drought stress34.738
SRR1811619moderate drought stress34.703

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain67.199
DRR006520Root Summer glycyrrhizin high producing strain66.298
DRR006521Root Winter glycyrrhizin high producing strain68.340
DRR006522Root Winter glycyrrhizin high producing strain66.750
DRR006523Root Summer glycyrrhizin low producing strain78.566
DRR006524Root Summer glycyrrhizin low producing strain78.499
DRR006525Leaf Summer glycyrrhizin high producing strain40.948
DRR006526Leaf Summer glycyrrhizin high producing strain40.909

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)154.290
SRR2868004Drought Stress(Tissue:root)154.767
SRR2967015Control (Tissue:root)141.210

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave62.697
SRR9715740Leave69.401
SRR9715741Leave72.610
SRR9715739Root30.500
SRR9715742Root95.288
SRR9715743Root82.461

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h53.802
SRR8749028MeJA induced 9h112.067
SRR8749029MeJA induced 9h34.347
SRR8749030Uninduced30.053
SRR8749031Uninduced15.557
SRR8749032Uninduced18.125

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root98.741
SRR8400027Control-Root93.779

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved