Gene detail information of Glyur000541s00027330.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G52600.12.00E-87Peptidase S24/S26A/S26B/S26C family protein
NRXP_007150740.16.24E-114hypothetical protein PHAVU_005G176700g, partial [Phaseolus vulgaris]
COGYP_184450.12.00E-10signal peptidase I [Thermococcus kodakarensis KOD1]
trEMBLtr|V7BXU3|V7BXU3_PHAVU2.00E-114Uncharacterized protein {ECO:0000313|EMBL:ESW22734.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00541119706123989+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13280SEC11, sipW EC:3.4.-.- Protein export map03060


Gene Ontology

biological_process

GO:0006465  signal peptide processing


cellular_component

GO:0016020  membrane


molecular_function

GO:0008233  peptidase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000541s00027330.1PF00717.18Peptidase_S241171689.50E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control56.581
SRR1783600control56.328
SRR1783602moderate drought stress39.822
SRR1811619moderate drought stress39.858

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain110.903
DRR006520Root Summer glycyrrhizin high producing strain111.162
DRR006521Root Winter glycyrrhizin high producing strain58.894
DRR006522Root Winter glycyrrhizin high producing strain57.677
DRR006523Root Summer glycyrrhizin low producing strain95.721
DRR006524Root Summer glycyrrhizin low producing strain97.727
DRR006525Leaf Summer glycyrrhizin high producing strain54.647
DRR006526Leaf Summer glycyrrhizin high producing strain51.379

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)187.181
SRR2868004Drought Stress(Tissue:root)153.367
SRR2967015Control (Tissue:root)149.728

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave58.660
SRR9715740Leave59.501
SRR9715741Leave58.945
SRR9715739Root33.553
SRR9715742Root53.446
SRR9715743Root47.898

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h168.126
SRR8749028MeJA induced 9h77.080
SRR8749029MeJA induced 9h142.228
SRR8749030Uninduced47.402
SRR8749031Uninduced47.449
SRR8749032Uninduced37.168

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root171.580
SRR8400027Control-Root187.811

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved