Gene detail information of Glyur000542s00017551.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G04580.20Signal transduction histidine kinase, hybrid-type, ethylene sensor
NRKHN14808.10Protein EIN4 [Glycine soja]
COGNP_923664.16.00E-50two-component hybrid sensor and regulator [Gloeobacter violaceus PCC 7421]
Swissprottr|Q9ZTP3|EIN4_ARATH0Protein EIN4
trEMBLtr|I1NIL8|I1NIL8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G36440.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005426762872029-


Gene family

Gene familysubfamily
Transcription Factors FamilyOrphans


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14509ETR, ERS EC:2.7.13.- MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075


Gene Ontology

biological_process

GO:0000160  phosphorelay signal transduction system

GO:0007165  signal transduction

GO:0009873  ethylene-activated signaling pathway


cellular_component

GO:0005789  endoplasmic reticulum membrane

GO:0016020  membrane


molecular_function

GO:0000155  phosphorelay sensor kinase activity

GO:0004673  protein histidine kinase activity

GO:0004871  signal transducer activity

GO:0005515  protein binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000542s00017551.1PF01590.21GAF1903388.50E-12
Glyur000542s00017551.1PF00512.20HisKA3754351.20E-05
Glyur000542s00017551.1PF00072.19Response_reg6407531.90E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.483
SRR1783600control9.442
SRR1783602moderate drought stress11.274
SRR1811619moderate drought stress11.223

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.306
DRR006520Root Summer glycyrrhizin high producing strain18.312
DRR006521Root Winter glycyrrhizin high producing strain41.783
DRR006522Root Winter glycyrrhizin high producing strain40.455
DRR006523Root Summer glycyrrhizin low producing strain31.841
DRR006524Root Summer glycyrrhizin low producing strain31.978
DRR006525Leaf Summer glycyrrhizin high producing strain11.020
DRR006526Leaf Summer glycyrrhizin high producing strain11.172

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)30.559
SRR2868004Drought Stress(Tissue:root)38.143
SRR2967015Control (Tissue:root)35.621

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.885
SRR9715740Leave25.748
SRR9715741Leave28.156
SRR9715739Root20.040
SRR9715742Root42.579
SRR9715743Root39.394

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h75.157
SRR8749028MeJA induced 9h29.694
SRR8749029MeJA induced 9h44.900
SRR8749030Uninduced49.784
SRR8749031Uninduced106.241
SRR8749032Uninduced73.525

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.730
SRR8400027Control-Root16.995

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved