Gene detail information of Glyur000543s00030818.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G74030.1 | 0 | enolase 1 |
| NR | XP_004488376.1 | 0 | PREDICTED: enolase 1, chloroplastic-like [Cicer arietinum] |
| COG | NP_247203.1 | 2.00E-149 | phosphopyruvate hydratase [Methanocaldococcus jannaschii DSM 2661] |
| Swissprot | tr|Q9C9C4|ENO1_ARATH | 0 | Enolase 1, chloroplastic (Precursor) |
| trEMBL | tr|I1N1N3|I1N1N3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G22780.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00543 | 16877 | 21430 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000543s00030818.1 | PF03952.11 | Enolase_N | 66 | 194 | 2.60E-55 |
| Glyur000543s00030818.1 | PF00113.17 | Enolase_C | 203 | 481 | 4.20E-136 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.603 |
| SRR1783600 | control | 38.710 |
| SRR1783602 | moderate drought stress | 19.657 |
| SRR1811619 | moderate drought stress | 19.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.312 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.849 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.385 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.384 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.498 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 31.209 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.862 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 93.737 |
| SRR2868004 | Drought Stress(Tissue:root) | 70.521 |
| SRR2967015 | Control (Tissue:root) | 65.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 13.914 |
| SRR9715740 | Leave | 8.017 |
| SRR9715741 | Leave | 11.064 |
| SRR9715739 | Root | 20.097 |
| SRR9715742 | Root | 38.712 |
| SRR9715743 | Root | 36.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 43.172 |
| SRR8749028 | MeJA induced 9h | 63.179 |
| SRR8749029 | MeJA induced 9h | 33.449 |
| SRR8749030 | Uninduced | 55.730 |
| SRR8749031 | Uninduced | 40.640 |
| SRR8749032 | Uninduced | 30.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 83.931 |
| SRR8400027 | Control-Root | 65.052 |