Gene detail information of Glyur000544s00017439.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08590.10Leucine-rich receptor-like protein kinase family protein
NRXP_003590988.10Receptor-like protein kinase [Medicago truncatula]
COGYP_004775215.13.00E-58RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9FRS6|PXL1_ARATH0Leucine-rich repeat receptor-like protein kinase PXL1 (Precursor)
trEMBLtr|G7I6U4|G7I6U4_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:AES61239.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00544133774137157+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000544s00017439.1PF08263.7LRRNT_2651092.60E-07
Glyur000544s00017439.1PF13855.1LRR_82092676.30E-08
Glyur000544s00017439.1PF12799.2LRR_42803171.10E-06
Glyur000544s00017439.1PF12799.2LRR_43303655.30E-07
Glyur000544s00017439.1PF00560.28LRR_14024200.83
Glyur000544s00017439.1PF13855.1LRR_85205802.80E-09
Glyur000544s00017439.1PF13855.1LRR_85866282.00E-06
Glyur000544s00017439.1PF00069.20Pkinase74710164.90E-52


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.323
SRR1783600control0.327
SRR1783602moderate drought stress0.186
SRR1811619moderate drought stress0.183

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.112
DRR006520Root Summer glycyrrhizin high producing strain0.136
DRR006521Root Winter glycyrrhizin high producing strain0.035
DRR006522Root Winter glycyrrhizin high producing strain0.034
DRR006523Root Summer glycyrrhizin low producing strain0.449
DRR006524Root Summer glycyrrhizin low producing strain0.454
DRR006525Leaf Summer glycyrrhizin high producing strain0.222
DRR006526Leaf Summer glycyrrhizin high producing strain0.175

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.167
SRR2868004Drought Stress(Tissue:root)7.641
SRR2967015Control (Tissue:root)7.511

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.427
SRR9715740Leave0.269
SRR9715741Leave0.333
SRR9715739Root0.164
SRR9715742Root1.403
SRR9715743Root1.282

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.018
SRR8749028MeJA induced 9h0.052
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.040
SRR8749031Uninduced0.112
SRR8749032Uninduced0.042

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.356
SRR8400027Control-Root0.894

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved