Gene detail information of Glyur000545s00023427.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G17950.1 | 2.00E-68 | myb domain protein 52 |
| NR | AES76277.2 | 8.93E-117 | myb transcription factor [Medicago truncatula] |
| Swissprot | tr|Q9FDW1|MYB44_ARATH | 2.00E-34 | Transcription factor MYB44 |
| trEMBL | tr|G7KJN3|G7KJN3_MEDTR | 3.00E-117 | Myb transcription factor {ECO:0000313|EMBL:AES76277.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00545 | 138795 | 141895 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000545s00023427.1 | PF13921.1 | Myb_DNA-bind_6 | 7 | 67 | 7.70E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.752 |
| SRR1783600 | control | 6.834 |
| SRR1783602 | moderate drought stress | 9.460 |
| SRR1811619 | moderate drought stress | 9.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.935 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.946 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.470 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.682 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.815 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.950 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.077 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 7.940 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.930 |
| SRR2967015 | Control (Tissue:root) | 6.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.084 |
| SRR9715740 | Leave | 0.461 |
| SRR9715741 | Leave | 0.055 |
| SRR9715739 | Root | 0.986 |
| SRR9715742 | Root | 3.094 |
| SRR9715743 | Root | 1.888 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.104 |
| SRR8749028 | MeJA induced 9h | 1.575 |
| SRR8749029 | MeJA induced 9h | 2.402 |
| SRR8749030 | Uninduced | 2.734 |
| SRR8749031 | Uninduced | 20.209 |
| SRR8749032 | Uninduced | 6.599 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 19.843 |
| SRR8400027 | Control-Root | 19.117 |