Gene detail information of Glyur000548s00021018.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G10670.40ATP-citrate lyase A-1
NRXP_004489821.10PREDICTED: ATP-citrate synthase alpha chain protein 2-like [Cicer arietinum]
COGYP_004151630.11.00E-112ATP-citrate synthase (ATP-citrate (pro-S-)-lyase)(citrate cleavage enzyme) [Thermovibrio ammonificans HB-1]
Swissprottr|Q9SGY2|ACLA1_ARATH0ATP-citrate synthase alpha chain protein 1
trEMBLtr|G7K076|G7K076_MEDTR0ATP-citrate synthase alpha chain protein {ECO:0000313|EMBL:AES96157.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0054838947954-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01648ACLY EC:2.3.3.8 Citrate cycle (TCA cycle) map00020
Carbon fixation pathways in prokaryotesmap00720


Gene Ontology

molecular_function

GO:0005524  ATP binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000548s00021018.1PF08442.5ATP-grasp_262032.00E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control99.268
SRR1783600control97.942
SRR1783602moderate drought stress66.541
SRR1811619moderate drought stress65.168

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain68.349
DRR006520Root Summer glycyrrhizin high producing strain66.587
DRR006521Root Winter glycyrrhizin high producing strain33.594
DRR006522Root Winter glycyrrhizin high producing strain32.651
DRR006523Root Summer glycyrrhizin low producing strain48.458
DRR006524Root Summer glycyrrhizin low producing strain48.284
DRR006525Leaf Summer glycyrrhizin high producing strain50.356
DRR006526Leaf Summer glycyrrhizin high producing strain49.749

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)250.775
SRR2868004Drought Stress(Tissue:root)187.244
SRR2967015Control (Tissue:root)169.026

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave120.445
SRR9715740Leave56.989
SRR9715741Leave87.301
SRR9715739Root77.690
SRR9715742Root94.055
SRR9715743Root84.768

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h115.203
SRR8749028MeJA induced 9h172.441
SRR8749029MeJA induced 9h97.338
SRR8749030Uninduced625.269
SRR8749031Uninduced970.473
SRR8749032Uninduced251.136

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root216.518
SRR8400027Control-Root199.056

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved