Gene detail information of Glyur000548s00021031.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G60490.10vacuolar protein sorting 34
NRXP_004489830.10PREDICTED: phosphatidylinositol 3-kinase, root isoform-like isoform X1 [Cicer arietinum]
Swissprottr|P42347|PI3K1_SOYBN0Phosphatidylinositol 3-kinase, root isoform
trEMBLtr|I1K9Q4|I1K9Q4_SOYBN0Phosphatidylinositol 3-kinase {ECO:0000256|PIRNR:PIRNR000587}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005488330393492+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00914PIK3C3, VPS34 EC:2.7.1.137 Inositol phosphate metabolism map00562
Phosphatidylinositol signaling systemmap04070
Phagosomemap04145
Autophagy - animalmap04140
Autophagy - yeastmap04138
Tuberculosismap05152


Gene Ontology

biological_process

GO:0046854  phosphatidylinositol phosphorylation

GO:0048015  phosphatidylinositol-mediated signaling


molecular_function

GO:0005488  binding

GO:0005515  protein binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0016773  phosphotransferase activity, alcohol group as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000548s00021031.1PF00792.19PI3K_C2471882.20E-37
Glyur000548s00021031.1PF00613.15PI3Ka2744512.80E-69
Glyur000548s00021031.1PF00454.22PI3_PI4_kinase5577577.20E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.069
SRR1783600control7.132
SRR1783602moderate drought stress9.648
SRR1811619moderate drought stress9.666

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.984
DRR006520Root Summer glycyrrhizin high producing strain12.884
DRR006521Root Winter glycyrrhizin high producing strain8.031
DRR006522Root Winter glycyrrhizin high producing strain7.474
DRR006523Root Summer glycyrrhizin low producing strain13.456
DRR006524Root Summer glycyrrhizin low producing strain13.435
DRR006525Leaf Summer glycyrrhizin high producing strain9.764
DRR006526Leaf Summer glycyrrhizin high producing strain9.913

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)21.899
SRR2868004Drought Stress(Tissue:root)24.234
SRR2967015Control (Tissue:root)26.378

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.634
SRR9715740Leave14.168
SRR9715741Leave16.498
SRR9715739Root4.742
SRR9715742Root14.894
SRR9715743Root12.636

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.040
SRR8749028MeJA induced 9h11.412
SRR8749029MeJA induced 9h7.335
SRR8749030Uninduced6.150
SRR8749031Uninduced5.344
SRR8749032Uninduced3.358

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.468
SRR8400027Control-Root21.521

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved