Gene detail information of Glyur000550s00021756.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G32700.1 | 9.00E-54 | PLATZ transcription factor family protein |
| NR | XP_003535238.1 | 2.68E-128 | PREDICTED: uncharacterized protein LOC100809455 [Glycine max] |
| Swissprot | tr|P0CB19|Y3081_ARATH | 2.00E-06 | Uncharacterized protein At3g50808 |
| trEMBL | tr|I1L944|I1L944_SOYBN | 1.00E-130 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G07240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00550 | 95932 | 97660 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | PLATZ |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000550s00021756.1 | PF04640.9 | PLATZ | 67 | 139 | 4.80E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.003 |
| SRR1783600 | control | 1.964 |
| SRR1783602 | moderate drought stress | 0.824 |
| SRR1811619 | moderate drought stress | 0.833 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.487 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.403 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.935 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.693 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.509 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.469 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.664 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.592 |
| SRR2967015 | Control (Tissue:root) | 6.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.730 |
| SRR9715740 | Leave | 0.175 |
| SRR9715741 | Leave | 0.551 |
| SRR9715739 | Root | 1.163 |
| SRR9715742 | Root | 1.328 |
| SRR9715743 | Root | 1.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.187 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.013 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.682 |
| SRR8400027 | Control-Root | 12.691 |