Gene detail information of Glyur000552s00024332.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31950.12.00E-41cytochrome P450, family 82, subfamily C, polypeptide 3
NRKEH30996.13.24E-93cytochrome P450 family protein [Medicago truncatula]
COGYP_006808796.12.00E-18cytochrome P450 [Nocardia brasiliensis ATCC 700358]
Swissprottr|O49858|C82A3_SOYBN2.00E-58Cytochrome P450 82A3
trEMBLtr|A0A072UNP8|A0A072UNP8_MEDTR1.00E-93Cytochrome P450 family protein {ECO:0000313|EMBL:KEH30996.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00552428323117-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP82C3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006096  glycolytic process

GO:0055114  oxidation-reduction process


cellular_component

GO:0000015  phosphopyruvate hydratase complex


molecular_function

GO:0000287  magnesium ion binding

GO:0004634  phosphopyruvate hydratase activity

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000552s00024332.1PF00113.17Enolase_C631082.00E-12
Glyur000552s00024332.1PF00067.17p4501092026.00E-28
Glyur000552s00024332.1PF00067.17p4502543955.50E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.792
SRR1783600control3.071
SRR1783602moderate drought stress5.821
SRR1811619moderate drought stress5.874

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.440
DRR006520Root Summer glycyrrhizin high producing strain0.532
DRR006521Root Winter glycyrrhizin high producing strain4.187
DRR006522Root Winter glycyrrhizin high producing strain3.253
DRR006523Root Summer glycyrrhizin low producing strain0.570
DRR006524Root Summer glycyrrhizin low producing strain0.957
DRR006525Leaf Summer glycyrrhizin high producing strain0.562
DRR006526Leaf Summer glycyrrhizin high producing strain0.318

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.578
SRR2868004Drought Stress(Tissue:root)5.190
SRR2967015Control (Tissue:root)4.280

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.739
SRR9715740Leave1.792
SRR9715741Leave5.006
SRR9715739Root1.024
SRR9715742Root0.937
SRR9715743Root0.817

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.500
SRR8749028MeJA induced 9h17.946
SRR8749029MeJA induced 9h34.331
SRR8749030Uninduced60.738
SRR8749031Uninduced60.282
SRR8749032Uninduced89.626

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.255
SRR8400027Control-Root3.092

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved