Gene detail information of Glyur000552s00024334.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31940.13.00E-37cytochrome P450, family 82, subfamily C, polypeptide 4
NRKEH30996.14.35E-93cytochrome P450 family protein [Medicago truncatula]
COGYP_004303682.15.00E-20cytochrome P450 [Polymorphum gilvum SL003B-26A1]
Swissprottr|O49858|C82A3_SOYBN2.00E-58Cytochrome P450 82A3
trEMBLtr|A0A072UNP8|A0A072UNP8_MEDTR2.00E-93Cytochrome P450 family protein {ECO:0000313|EMBL:KEH30996.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005522314135244-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP82C4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000552s00024334.1PF00067.17p450201945.80E-48
Glyur000552s00024334.1PF00067.17p4504245492.20E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.676
SRR1783600control1.674
SRR1783602moderate drought stress2.173
SRR1811619moderate drought stress2.100

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.636
DRR006520Root Summer glycyrrhizin high producing strain0.538
DRR006521Root Winter glycyrrhizin high producing strain3.940
DRR006522Root Winter glycyrrhizin high producing strain3.495
DRR006523Root Summer glycyrrhizin low producing strain0.692
DRR006524Root Summer glycyrrhizin low producing strain0.519
DRR006525Leaf Summer glycyrrhizin high producing strain0.556
DRR006526Leaf Summer glycyrrhizin high producing strain0.518

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.796
SRR2868004Drought Stress(Tissue:root)16.644
SRR2967015Control (Tissue:root)16.921

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.810
SRR9715740Leave3.137
SRR9715741Leave9.513
SRR9715739Root0.944
SRR9715742Root1.237
SRR9715743Root1.031

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.151
SRR8749028MeJA induced 9h36.158
SRR8749029MeJA induced 9h58.350
SRR8749030Uninduced118.191
SRR8749031Uninduced158.731
SRR8749032Uninduced182.327

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.100
SRR8400027Control-Root3.251

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved