Gene detail information of Glyur000552s00024337.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00552 | 45930 | 48993 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01867 | WARS, trpS | EC:6.1.1.2 | Aminoacyl-tRNA biosynthesis | map00970 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.363 |
| SRR1783600 | control | 25.217 |
| SRR1783602 | moderate drought stress | 20.319 |
| SRR1811619 | moderate drought stress | 25.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 65.802 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 59.115 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.858 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.764 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.081 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.304 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.421 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.489 |
| SRR2967015 | Control (Tissue:root) | 0.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.084 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.102 |
| SRR9715742 | Root | 0.164 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.759 |
| SRR8749028 | MeJA induced 9h | 1.692 |
| SRR8749029 | MeJA induced 9h | 2.674 |
| SRR8749030 | Uninduced | 1.602 |
| SRR8749031 | Uninduced | 0.911 |
| SRR8749032 | Uninduced | 1.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.845 |
| SRR8400027 | Control-Root | 0.894 |