Gene detail information of Glyur000555s00023336.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G16770.14.00E-27ethylene-responsive element binding protein
NRACM79120.16.97E-83ethylene-responsive factor 2 [Halimodendron halodendron]
Swissprottr|P42736|RAP23_ARATH3.00E-48Ethylene-responsive transcription factor RAP2-3
trEMBLtr|D8KYG4|D8KYG4_9FABA3.00E-83Ethylene-responsive factor 2 {ECO:0000313|EMBL:ACM79120.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005552176423829+


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000555s00023336.1PF00847.15AP2991486.10E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control189.900
SRR1783600control195.385
SRR1783602moderate drought stress267.888
SRR1811619moderate drought stress276.731

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain61.459
DRR006520Root Summer glycyrrhizin high producing strain64.339
DRR006521Root Winter glycyrrhizin high producing strain1940.018
DRR006522Root Winter glycyrrhizin high producing strain1901.992
DRR006523Root Summer glycyrrhizin low producing strain167.933
DRR006524Root Summer glycyrrhizin low producing strain171.192
DRR006525Leaf Summer glycyrrhizin high producing strain48.607
DRR006526Leaf Summer glycyrrhizin high producing strain48.301

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)190.734
SRR2868004Drought Stress(Tissue:root)243.322
SRR2967015Control (Tissue:root)195.362

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave140.614
SRR9715740Leave64.513
SRR9715741Leave90.251
SRR9715739Root364.655
SRR9715742Root411.237
SRR9715743Root363.634

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h131.523
SRR8749028MeJA induced 9h214.894
SRR8749029MeJA induced 9h157.755
SRR8749030Uninduced599.022
SRR8749031Uninduced347.798
SRR8749032Uninduced408.906

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root361.033
SRR8400027Control-Root305.559

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved