Gene detail information of Glyur000555s00023350.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02680.1 | 0 | ETO1-like 1 |
| NR | XP_006604459.1 | 0 | PREDICTED: ETO1-like protein 1-like isoform X2 [Glycine max] |
| Swissprot | tr|Q9ZQX6|ETOL1_ARATH | 0 | ETO1-like protein 1 |
| trEMBL | tr|I1N9K4|I1N9K4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G34200.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00555 | 127620 | 133365 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | BTB |
| Ubiquitin Family | 3-box |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000555s00023350.2 | PF00515.23 | TPR_1 | 710 | 740 | 4.60E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.429 |
| SRR1783600 | control | 7.439 |
| SRR1783602 | moderate drought stress | 10.311 |
| SRR1811619 | moderate drought stress | 10.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.842 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.728 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.744 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.341 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.991 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.874 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.945 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.867 |
| SRR2868004 | Drought Stress(Tissue:root) | 15.339 |
| SRR2967015 | Control (Tissue:root) | 18.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.965 |
| SRR9715740 | Leave | 6.872 |
| SRR9715741 | Leave | 7.043 |
| SRR9715739 | Root | 5.574 |
| SRR9715742 | Root | 12.116 |
| SRR9715743 | Root | 11.810 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.219 |
| SRR8749028 | MeJA induced 9h | 3.618 |
| SRR8749029 | MeJA induced 9h | 1.804 |
| SRR8749030 | Uninduced | 1.436 |
| SRR8749031 | Uninduced | 0.872 |
| SRR8749032 | Uninduced | 0.930 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.185 |
| SRR8400027 | Control-Root | 14.779 |