Gene detail information of Glyur000557s00018783.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23250.1 | 1.00E-70 | myb domain protein 15 |
| NR | NP_001241018.1 | 7.52E-135 | uncharacterized protein LOC100807569 [Glycine max] |
| Swissprot | tr|Q7XBH4|MYB4_ORYSJ | 1.00E-81 | Myb-related protein Myb4 |
| trEMBL | tr|Q9XIU5|Q9XIU5_SOYBN | 3.00E-135 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G35180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00557 | 43866 | 46386 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000557s00018783.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 8.80E-16 |
| Glyur000557s00018783.1 | PF00249.26 | Myb_DNA-binding | 67 | 112 | 2.00E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 75.217 |
| SRR1783600 | control | 74.840 |
| SRR1783602 | moderate drought stress | 90.765 |
| SRR1811619 | moderate drought stress | 89.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 124.708 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 123.029 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.253 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.029 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 52.262 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 52.481 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.838 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 57.472 |
| SRR2868004 | Drought Stress(Tissue:root) | 81.359 |
| SRR2967015 | Control (Tissue:root) | 57.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 18.858 |
| SRR9715740 | Leave | 7.763 |
| SRR9715741 | Leave | 22.076 |
| SRR9715739 | Root | 7.516 |
| SRR9715742 | Root | 22.911 |
| SRR9715743 | Root | 19.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 49.825 |
| SRR8749028 | MeJA induced 9h | 65.615 |
| SRR8749029 | MeJA induced 9h | 48.613 |
| SRR8749030 | Uninduced | 100.065 |
| SRR8749031 | Uninduced | 85.091 |
| SRR8749032 | Uninduced | 107.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 72.068 |
| SRR8400027 | Control-Root | 84.237 |