Gene detail information of Glyur000557s00018790.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G23310.10AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
NRXP_003535423.10PREDICTED: serine/threonine-protein kinase 38-like isoform X1 [Glycine max]
COGYP_001511011.16.00E-24WD-40 repeat-containing serine/threonin protein kinase [Frankia sp. EAN1pec]
Swissprottr|Q9LE81|IRE_ARATH5.00E-79Probable serine/threonine protein kinase IRE {ECO:0000305}
trEMBLtr|K7LK50|K7LK50_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G32480.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold005578324590002+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000557s00018790.1PF00069.20Pkinase1224092.70E-57
Glyur000557s00018790.1PF00433.19Pkinase_C4284750.00015


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.512
SRR1783600control16.519
SRR1783602moderate drought stress13.218
SRR1811619moderate drought stress13.036

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.628
DRR006520Root Summer glycyrrhizin high producing strain18.401
DRR006521Root Winter glycyrrhizin high producing strain10.172
DRR006522Root Winter glycyrrhizin high producing strain9.822
DRR006523Root Summer glycyrrhizin low producing strain20.252
DRR006524Root Summer glycyrrhizin low producing strain20.388
DRR006525Leaf Summer glycyrrhizin high producing strain12.791
DRR006526Leaf Summer glycyrrhizin high producing strain12.830

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.592
SRR2868004Drought Stress(Tissue:root)39.288
SRR2967015Control (Tissue:root)34.380

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.561
SRR9715740Leave25.673
SRR9715741Leave27.329
SRR9715739Root2.766
SRR9715742Root13.435
SRR9715743Root12.050

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.124
SRR8749028MeJA induced 9h26.283
SRR8749029MeJA induced 9h14.351
SRR8749030Uninduced17.874
SRR8749031Uninduced13.375
SRR8749032Uninduced8.742

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.438
SRR8400027Control-Root33.475

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved